RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 C21orf140B9A014 251 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 ONECUT2O95948 504 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 ANXA5P08758 320 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 HBQ1P09105 142 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 EZRP15311 586 aaKnown RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 HRH2P25021 359 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 GGT5P36269 586 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 HNMTP50135 292 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 VSX2P58304 361 aaPredicted RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 SNRPNP63162 240 aaKnown RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 SLC29A2Q14542 456 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 UAP1Q16222 522 aaPredicted RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 TCTE1Q5JU00 501 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 CDKL4Q5MAI5 379 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 FAM198BQ6UWH4 519 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 VN1R4Q7Z5H5 301 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 DTWD1Q8N5C7 304 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 N4BP2L2Q92802 583 aaPredicted RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 MR1Q95460 341 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 NXNL1Q96CM4 212 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 WDR70Q9NW82 654 aa16.91■□□□□ 0.3
VPS52-214ENST00000463486 DHCR7Q9UBM7 475 aaKnown RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 RALYQ9UKM9 306 aaKnown RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 MDC1Q14676 2089 aaKnown RBP16.91■□□□□ 0.3
VPS52-214ENST00000463486 POC1B-GALNT4F8VUJ3 575 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 LCMT2O60294 686 aaKnown RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 SLU7O95391 586 aaKnown RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 KLK3P07288 261 aaPredicted RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 CDH1P12830 882 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 MTHFD2P13995 350 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 TFEBP19484 476 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 GDF5P43026 501 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 MSH2P43246 934 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 SERPINB9P50453 376 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 NFKB2Q00653 900 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 CRTC2Q53ET0 693 aaPredicted RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 C1orf189Q5VU69 101 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 RAPH1Q70E73 1250 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 CCDC91Q7Z6B0 441 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 C17orf64Q86WR6 236 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 GPSM1Q86YR5 675 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 KCTD4Q8WVF5 259 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 STARD8Q92502 1023 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 TTC9Q92623 222 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 NEIL2Q969S2 332 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 KIAA1143Q96AT1 154 aaPredicted RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 ALKBH8Q96BT7 664 aaKnown RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 C10orf90Q96M02 699 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 DPH2Q9BQC3 489 aaPredicted RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 TMEM79Q9BSE2 394 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 HAUS8Q9BT25 410 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 EFHD1Q9BUP0 239 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 SARGQ9BW04 601 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 GPR87Q9BY21 358 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 FAM117AQ9C073 453 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 ALG9Q9H6U8 611 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 NMRAL1Q9HBL8 299 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 PTBP2Q9UKA9 531 aaKnown RBP16.9■□□□□ 0.3
VPS52-214ENST00000463486 SRPK3Q9UPE1 567 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 SLC22A14Q9Y267 594 aa16.9■□□□□ 0.3
VPS52-214ENST00000463486 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 A0A087X1B8 175 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 A0A096LPK6 155 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 P2RX6O15547 441 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 CNOT3O75175 753 aaKnown RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 KLF7O75840 302 aaPredicted RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 RECKO95980 971 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 INHBAP08476 426 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 FURINP09958 794 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 LTA4HP09960 611 aaKnown RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 RAB40ALP0C0E4 278 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 PTPN4P29074 926 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 SERPINB8P50452 374 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 VSNL1P62760 191 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 GRM7Q14831 915 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 CATSPEREQ5SY80 951 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 YOD1Q5VVQ6 348 aaPredicted RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 ADGRD1Q6QNK2 874 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 TTLL10Q6ZVT0 673 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 TBC1D1Q86TI0 1168 aaPredicted RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 TMEM151BQ8IW70 566 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 PLD6Q8N2A8 252 aaKnown RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 PDPRQ8NCN5 879 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 PROKR1Q8TCW9 393 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.29
VPS52-214ENST00000463486 TM4SF19Q96DZ7 209 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 NDC1Q9BTX1 674 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 NLNQ9BYT8 704 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 SPNS1Q9H2V7 528 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 CUTCQ9NTM9 273 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 FETUBQ9UGM5 382 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 KCND3Q9UK17 655 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 FARSAQ9Y285 508 aaKnown RBP16.89■□□□□ 0.29
VPS52-214ENST00000463486 ASB1Q9Y576 335 aa16.89■□□□□ 0.29
VPS52-214ENST00000463486 EXOC1LA0A1B0GW35 172 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 FEZF1A0PJY2 475 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 HYKKA2RU49 373 aa16.88■□□□□ 0.29
VPS52-214ENST00000463486 NCF1BA6NI72 391 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms