RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 GRK3P35626 688 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ZNF460Q14592 562 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 PTCHD3Q3KNS1 767 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 FAM199XQ6PEV8 388 aaPredicted RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 MBOAT1Q6ZNC8 495 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 TRMT10CQ7L0Y3 403 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ENDOVQ8N8Q3 282 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 APOBEC4Q8WW27 367 aaKnown RBP12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 KIAA1191Q96A73 305 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 NACC2Q96BF6 587 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 ATG10Q9H0Y0 220 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 WDR54Q9H977 334 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 CAB39LQ9H9S4 337 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 NMRAL1Q9HBL8 299 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 IKZF3Q9UKT9 509 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 TCFL5Q9UL49 500 aa12.49□□□□□ -0.41
R3HDM1-213ENST00000463230 SEC16AO15027 2179 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 PIAS1O75925 651 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 IGHEP01854 428 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CCDC166P0CW27 439 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CD1DP15813 335 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 NPPBP16860 134 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CCR8P51685 355 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 TSNQ15631 228 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 LINC00303Q3SY05 128 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 FRMPD2BQ6IN97 320 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 ADCK2Q7Z695 626 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 TBC1D1Q86TI0 1168 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 RAB43Q86YS6 212 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CSNK1A1LQ8N752 337 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 OR4K1Q8NGD4 311 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC44A1Q8WWI5 657 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 ARHGAP9Q9BRR9 750 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CNOT10Q9H9A5 744 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 PELI2Q9HAT8 420 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 CUEDC1Q9NWM3 386 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 IFT80Q9P2H3 777 aaPredicted RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 ZNF180Q9UJW8 692 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 MRPS18BQ9Y676 258 aaKnown RBP12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 ANKRD12Q6UB98 2062 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 FER1L5A0AVI2 2057 aa12.48□□□□□ -0.41
R3HDM1-213ENST00000463230 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 HAT1O14929 419 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 PHGDHO43175 533 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CTSBP07858 339 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 PRKAR1AP10644 381 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 GGT5P36269 586 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 SERPINB8P50452 374 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CSRP3P50461 194 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CSNK1G2P78368 415 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 NDUFA9Q16795 377 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 LCN10Q6JVE6 187 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 MRPL14Q6P1L8 145 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 C16orf46Q6P387 395 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 TTLL10Q6ZVT0 673 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 OVCH1Q7RTY7 1134 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 GPSM1Q86YR5 675 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 EGFL8Q99944 293 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CAPS2Q9BXY5 557 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 DHCR7Q9UBM7 475 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 ACOT9Q9Y305 439 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 IKBKGQ9Y6K9 419 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 MDC1Q14676 2089 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 LOC105369274A0A096LPK9 316 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 LOC102723532A0A0G2JNH3 316 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CDC14CA4D256 554 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 H7BY64 318 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 GUCA1CO95843 209 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 LTA4HP09960 611 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 SLC35E2BP0CK96 405 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 PGGT1BP53609 377 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 YBX1P67809 324 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 FAM53BQ14153 422 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 SULT1C3Q6IMI6 304 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 RAPH1Q70E73 1250 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 APLFQ8IW19 511 aaPredicted RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 OR4N4Q8N0Y3 316 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 CAMKVQ8NCB2 501 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 STAG3L4Q8TBR4 150 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 ISL2Q96A47 359 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 RHBDF1Q96CC6 855 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 PRAP1Q96NZ9 151 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 PITHD1Q9GZP4 211 aaPredicted RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 GEMIN8Q9NWZ8 242 aaKnown RBP12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 GPRC5BQ9NZH0 403 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 NFU1Q9UMS0 254 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 KCNE2Q9Y6J6 123 aa12.47□□□□□ -0.41
R3HDM1-213ENST00000463230 TRBC2A0A5B9 178 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms