RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 OR1L3Q8NH93 324 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TCP10LQ8TDR4 215 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-221ENST00000462352 FCRL4Q96PJ5 515 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ZFYVE21Q9BQ24 234 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 DDA1Q9BW61 102 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 CAPS2Q9BXY5 557 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PELI2Q9HAT8 420 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 FANCEQ9HB96 536 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 GPRC5BQ9NZH0 403 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PILRAQ9UKJ1 303 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 RARRES3Q9UL19 164 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PLCL2Q9UPR0 1127 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PLLPQ9Y342 182 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PCDHGA3Q9Y5H0 932 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 B3GALT1Q9Y5Z6 326 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 ACTL7BQ9Y614 415 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 PCM1Q15154 2024 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
CPNE1-221ENST00000462352 E7EQ34 232 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 G3V2L1 256 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 CLGNO14967 610 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 NVLO15381 856 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 CTSBP07858 339 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 MYL2P10916 166 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 EZRP15311 586 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 EPB42P16452 691 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 EPORP19235 508 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 VARSP26640 1264 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 CCR8P51685 355 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 MEF2AQ02078 507 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 RELAQ04206 551 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 FRMPD2BQ6IN97 320 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 METTL2BQ6P1Q9 378 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 NXPE4Q6UWF7 544 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 ZYG11AQ6WRX3 759 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 SLCO4C1Q6ZQN7 724 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 PLD3Q8IV08 490 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 SLC22A9Q8IVM8 553 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 MCATQ8IVS2 390 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 CCDC63Q8NA47 563 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 OR4K1Q8NGD4 311 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 RDH11Q8TC12 318 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 GATA6Q92908 595 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 FAM111AQ96PZ2 611 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 TEFMQ96QE5 360 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 ZPBPQ9BS86 351 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 ASPSCR1Q9BZE9 553 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 B3GNT4Q9C0J1 378 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 STMN4Q9H169 189 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 SPNS1Q9H2V7 528 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 SSU72Q9NP77 194 aaKnown RBP11.3□□□□□ -0.6
CPNE1-221ENST00000462352 FOXJ2Q9P0K8 574 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 SLC17A7Q9P2U7 560 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 PCDHGA7Q9Y5G6 932 aa11.3□□□□□ -0.6
CPNE1-221ENST00000462352 LOC105369274A0A096LPK9 316 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 LOC102723532A0A0G2JNH3 316 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 FEZF1A0PJY2 475 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 CDRT15L2A8MXV6 281 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 H3BMH7 237 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 E2F3O00716 465 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SRPX2O60687 465 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-221ENST00000462352 PRAMEF4O60810 478 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SASH3O75995 380 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 TIAF1O95411 115 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 RPS17P08708 135 aaKnown RBP11.29□□□□□ -0.6
CPNE1-221ENST00000462352 C1GALT1C1LP0DN25 315 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 CPA3P15088 417 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SLC5A2P31639 672 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 GRK3P35626 688 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ITGA1P56199 1179 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 CYP4F3Q08477 520 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 GTF2H2Q13888 395 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPNE1-221ENST00000462352 XKR6Q5GH73 641 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF678Q5SXM1 525 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 PRAMEF9Q5VWM5 478 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ATG9BQ674R7 924 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 PWWP2BQ6NUJ5 590 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 GTF2H2CQ6P1K8 395 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 GOLGA7Q7Z5G4 137 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 OR4N4Q8N0Y3 316 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF740Q8NDX6 193 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ARMC2Q8NEN0 867 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 ZNF285Q96NJ3 590 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 NSUN5Q96P11 429 aaKnown RBP11.29□□□□□ -0.6
CPNE1-221ENST00000462352 TMEM237Q96Q45 408 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 OR2A5Q96R48 311 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 C1QTNF3Q9BXJ4 246 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SPRTNQ9H040 489 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-221ENST00000462352 EHD1Q9H4M9 534 aa11.29□□□□□ -0.6
CPNE1-221ENST00000462352 SYNPO2LQ9H987 977 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms