RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 UAP1Q16222 522 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-206ENST00000462306 PRTGQ2VWP7 1150 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 ATP1A1-AS1Q5TC04 95 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 YOD1Q5VVQ6 348 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-206ENST00000462306 TTLL10Q6ZVT0 673 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 ADCK2Q7Z695 626 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 PLD3Q8IV08 490 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 UHMK1Q8TAS1 419 aaKnown RBP15.15■□□□□ 0.02
ERCC3-206ENST00000462306 PAFAH2Q99487 392 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 HAUS8Q9BT25 410 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 NLNQ9BYT8 704 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 CUTCQ9NTM9 273 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 TXLNGQ9NUQ3 528 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 CACNA1GO43497 2377 aa15.15■□□□□ 0.02
ERCC3-206ENST00000462306 A0A087WUV0 522 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 A0A1B0GX78 115 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 DSCR3O14972 297 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 ONECUT2O95948 504 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 EIF2S1P05198 315 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 ABHD2P08910 425 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 FURINP09958 794 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 MYBL2P10244 700 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 CDH1P12830 882 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 AGXTP21549 392 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 SLC26A3P40879 764 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 KCNC1P48547 511 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 HNMTP50135 292 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 RPS15P62841 145 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 DCDP81605 110 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 NFKB2Q00653 900 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 TBR1Q16650 682 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 FAM214AQ32MH5 1076 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 NKAIN1Q4KMZ8 207 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 SOWAHCQ53LP3 525 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 C16orf46Q6P387 395 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 RAPH1Q70E73 1250 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 FRA10AC1Q70Z53 315 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 TRMT10CQ7L0Y3 403 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 ENDOVQ8N8Q3 282 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 EIF1ADQ8N9N8 165 aaKnown RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 TTC29Q8NA56 475 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-206ENST00000462306 ABHD11Q8NFV4 315 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 EXTL1Q92935 676 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 KIAA1191Q96A73 305 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 RHBDF1Q96CC6 855 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 EGFL8Q99944 293 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 SNX15Q9NRS6 342 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 SLC22A11Q9NSA0 550 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 IGSF5Q9NSI5 407 aa15.14■□□□□ 0.01
ERCC3-206ENST00000462306 KCNE1BA0A087WTH5 132 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 HYKKA2RU49 373 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ESPNB1AK53 854 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ATXN7O15265 892 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 RIPK2O43353 540 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ALDOAP04075 364 aaKnown RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 C2P06681 752 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 INHBAP08476 426 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 LTA4HP09960 611 aaKnown RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ALAS2P22557 587 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 SLC6A12P48065 614 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 PMS2P54278 862 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 EMP3P54852 163 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ERV3-1Q14264 604 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 NCF4Q15080 339 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 C18orf21Q32NC0 220 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 CDKL4Q5MAI5 379 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 FAM69BQ5VUD6 431 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 CCDC91Q7Z6B0 441 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 SYVN1Q86TM6 617 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ISCA2Q86U28 154 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 THOC6Q86W42 341 aaKnown RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 GPSM1Q86YR5 675 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 GSPT2Q8IYD1 628 aaKnown RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 KLHDC8AQ8IYD2 350 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 CENPLQ8N0S6 344 aaPredicted RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ARHGEF39Q8N4T4 335 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 DTWD1Q8N5C7 304 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 CSNK1A1LQ8N752 337 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 OR4K1Q8NGD4 311 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 DCAKDQ8WVC6 231 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 WBP1Q96G27 269 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 C10orf90Q96M02 699 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 EPB41L4BQ9H329 900 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 TCFL5Q9UL49 500 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 RUVBL1Q9Y265 456 aaKnown RBP15.13■□□□□ 0.01
ERCC3-206ENST00000462306 SLC22A14Q9Y267 594 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 ACOT9Q9Y305 439 aa15.13■□□□□ 0.01
ERCC3-206ENST00000462306 MDC1Q14676 2089 aaKnown RBP15.12■□□□□ 0.01
ERCC3-206ENST00000462306 A0A087X1B8 175 aa15.12■□□□□ 0.01
ERCC3-206ENST00000462306 NCF1BA6NI72 391 aaPredicted RBP15.12■□□□□ 0.01
ERCC3-206ENST00000462306 NCF1CA8MVU1 366 aaPredicted RBP15.12■□□□□ 0.01
ERCC3-206ENST00000462306 C9J4A7 227 aa15.12■□□□□ 0.01
ERCC3-206ENST00000462306 TAPBPO15533 448 aa15.12■□□□□ 0.01
ERCC3-206ENST00000462306 P2RX6O15547 441 aa15.12■□□□□ 0.01
ERCC3-206ENST00000462306 CNOT3O75175 753 aaKnown RBP15.12■□□□□ 0.01
ERCC3-206ENST00000462306 KLF7O75840 302 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms