RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 CUTCQ9NTM9 273 aa10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 IFT80Q9P2H3 777 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 TLK1Q9UKI8 766 aa10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 RALYQ9UKM9 306 aaKnown RBP10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 PADI2Q9Y2J8 665 aa10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 ACOT9Q9Y305 439 aa10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
TRAPPC12-213ENST00000461577 EXOC1LA0A1B0GW35 172 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 A0A1B0GX78 115 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 HYKKA2RU49 373 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CDC14CA4D256 554 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 FITM1A5D6W6 292 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 NCF1BA6NI72 391 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 EIF4E1BA6NMX2 242 aaKnown RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 NCF1CA8MVU1 366 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 TXNDC9O14530 226 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 DSCR3O14972 297 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 ABHD2P08910 425 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CD63P08962 238 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 LTA4HP09960 611 aaKnown RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC35E2BP0CK96 405 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CDH1P12830 882 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 NCF1P14598 390 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 NPPBP16860 134 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 TYK2P29597 1187 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 RPS15AP62244 130 aaKnown RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 RPS18P62269 152 aaKnown RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 RELAQ04206 551 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 COL9A2Q14055 689 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CRTC2Q53ET0 693 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZNF385CQ66K41 422 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 FAM198BQ6UWH4 519 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 ZNF517Q6ZMY9 492 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 SYVN1Q86TM6 617 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 THOC6Q86W42 341 aaKnown RBP10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 PLD3Q8IV08 490 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 TBC1D19Q8N5T2 526 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CSNK1A1LQ8N752 337 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 EXTL1Q92935 676 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 EXT2Q93063 718 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 KIAA1191Q96A73 305 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 THAP11Q96EK4 314 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CABS1Q96KC9 395 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 UBXN10Q96LJ8 280 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 GBP5Q96PP8 586 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 RUFY1Q96T51 708 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 PAFAH2Q99487 392 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 DHRS4Q9BTZ2 278 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 NLNQ9BYT8 704 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 SNX15Q9NRS6 342 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 WWOXQ9NZC7 414 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 CD274Q9NZQ7 290 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 RNF112Q9ULX5 631 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 SH2B3Q9UQQ2 575 aa10.12□□□□□ -0.79
TRAPPC12-213ENST00000461577 DSPP15924 2871 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 A0A096LPK6 155 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ESPNB1AK53 854 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SUPT3HB4E1H0 165 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ATXN7O15265 892 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SUPT3HO75486 399 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 KRT38O76015 456 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 WDR47O94967 919 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ITGB2P05107 769 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 C2P06681 752 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 FAM153BP0C7A2 387 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 TFEBP19484 476 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 CNTFP26441 200 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 GMPRP36959 345 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC26A3P40879 764 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 CCR8P51685 355 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC9A5Q14940 896 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 NCF4Q15080 339 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 TGFBIQ15582 683 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 OR4D1Q15615 310 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 TBR1Q16650 682 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 NDUFA9Q16795 377 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 FAM83EQ2M2I3 478 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 MUM1Q2TAK8 710 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 PRTGQ2VWP7 1150 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 DEFB109BQ30KR1 87 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 FAM153CQ494X1 144 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 ATP1A1-AS1Q5TC04 95 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 LGSNQ5TDP6 509 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SULT1C3Q6IMI6 304 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 KLC3Q6P597 504 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 BORAQ6PGQ7 559 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 GSPT2Q8IYD1 628 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 METTL27Q8N6F8 245 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 EIF1ADQ8N9N8 165 aaKnown RBP10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 STAG3L4Q8TBR4 150 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 SLC5A11Q8WWX8 675 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 TTC9Q92623 222 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 PTERQ96BW5 349 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 RHBDF1Q96CC6 855 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 NXNL1Q96CM4 212 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 TSNARE1Q96NA8 513 aa10.11□□□□□ -0.79
TRAPPC12-213ENST00000461577 OR2A5Q96R48 311 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms