RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ARHGEF39Q8N4T4 335 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ESX1Q8N693 406 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 GALNT6Q8NCL4 622 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 UBTD2Q8WUN7 234 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 NEIL2Q969S2 332 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 RNF31Q96EP0 1072 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 NAF1Q96HR8 494 aaKnown RBP11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 PRAP1Q96NZ9 151 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 DCBLD2Q96PD2 775 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 EGFL8Q99944 293 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ZFYVE21Q9BQ24 234 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 SELENOSQ9BQE4 189 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ACTR5Q9H9F9 607 aaPredicted RBP11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ABCF3Q9NUQ8 709 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 PCMTD2Q9NV79 361 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 SLC22A14Q9Y267 594 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ASB1Q9Y576 335 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 AP1M2Q9Y6Q5 423 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 PTPRQQ9UMZ3 2332 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
ERGIC3-211ENST00000461043 ZFYVE26Q68DK2 2539 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 BOD1L1Q8NFC6 3051 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 LOC105369274A0A096LPK9 316 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 LOC102723532A0A0G2JNH3 316 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 NCF1BA6NI72 391 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 SYCE1LA8MT33 242 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 NCF1CA8MVU1 366 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 EFSO43281 561 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 CDH16O75309 829 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 MT-ND3P03897 115 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 SBK3P0C264 359 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 CDH1P12830 882 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 NCF1P14598 390 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 GDF5P43026 501 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 TSNAXIP1Q2TAA8 658 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 PRTGQ2VWP7 1150 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 TCTE1Q5JU00 501 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 RHBDD2Q6NTF9 364 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 LRRC69Q6ZNQ3 347 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 LCA5Q86VQ0 697 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 GPR135Q8IZ08 494 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 DSELQ8IZU8 1212 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 OR4N4Q8N0Y3 316 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 CYP4X1Q8N118 509 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 OR2W6PQ8NHA6 318 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 ACMSDQ8TDX5 336 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 EPS8L3Q8TE67 593 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 SLC5A11Q8WWX8 675 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 ALKBH8Q96BT7 664 aaKnown RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 CABS1Q96KC9 395 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 AKIRIN1Q9H9L7 192 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 LHX9Q9NQ69 397 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 CD274Q9NZQ7 290 aa11.6□□□□□ -0.55
ERGIC3-211ENST00000461043 SPTBP11277 2137 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 LOC101059948A0A1B0GTJ6 334 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 H0YGG7 62 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 MEN1O00255 615 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 MAP2K7O14733 419 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 STK16O75716 305 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 WDR47O94967 919 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 MED26O95402 600 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CAPN1P07384 714 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 HBQ1P09105 142 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 EPORP19235 508 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 WT1P19544 449 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 ITGAXP20702 1163 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 SLCO1A2P46721 670 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 HSPA7P48741 367 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 ATP1A2P50993 1020 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CCR8P51685 355 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 EMP3P54852 163 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 VSX2P58304 361 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 ARF3P61204 181 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 RPS15AP62244 130 aaKnown RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CDC16Q13042 620 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 E2F2Q14209 437 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 WASHC2DQ5SRD0 308 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CATSPEREQ5SY80 951 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 YOD1Q5VVQ6 348 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 KLC3Q6P597 504 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 NXPE4Q6UWF7 544 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 LRRC70Q7Z2Q7 622 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 VN1R4Q7Z5H5 301 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 VASH2Q86V25 355 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 PLD3Q8IV08 490 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 ZNF655Q8N720 491 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 SNRNP27Q8WVK2 155 aaKnown RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 N4BP2L2Q92802 583 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 TM4SF19Q96DZ7 209 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 TSNARE1Q96NA8 513 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 GBP5Q96PP8 586 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CCNL2Q96S94 520 aaPredicted RBP11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 TMEM109Q9BVC6 243 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CD244Q9BZW8 370 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 SPNS1Q9H2V7 528 aa11.59□□□□□ -0.55
ERGIC3-211ENST00000461043 CNOT10Q9H9A5 744 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms