RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PLK4O00444 970 aa15.03■□□□□ -0
SSR4-206ENST00000460616 FFAR3O14843 346 aa15.03■□□□□ -0
SSR4-206ENST00000460616 GPR42O15529 346 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PKMP14618 531 aaKnown RBP15.03■□□□□ -0
SSR4-206ENST00000460616 PRKACBP22694 351 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PIK3CGP48736 1102 aa15.03■□□□□ -0
SSR4-206ENST00000460616 CDKN1CP49918 316 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 NUDT6P53370 316 aa15.03■□□□□ -0
SSR4-206ENST00000460616 FCHO2Q0JRZ9 810 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PCBP2Q15366 365 aaKnown RBP eCLIP15.03■□□□□ -0
SSR4-206ENST00000460616 FAM214AQ32MH5 1076 aa15.03■□□□□ -0
SSR4-206ENST00000460616 INO80DQ53TQ3 878 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 UBXN11Q5T124 520 aa15.03■□□□□ -0
SSR4-206ENST00000460616 VTCN1Q7Z7D3 282 aa15.03■□□□□ -0
SSR4-206ENST00000460616 ZSWIM9Q86XI8 627 aa15.03■□□□□ -0
SSR4-206ENST00000460616 BHMTQ93088 406 aa15.03■□□□□ -0
SSR4-206ENST00000460616 ZFP42Q96MM3 310 aa15.03■□□□□ -0
SSR4-206ENST00000460616 KCNC2Q96PR1 638 aa15.03■□□□□ -0
SSR4-206ENST00000460616 MCCC1Q96RQ3 725 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 RAD9AQ99638 391 aa15.03■□□□□ -0
SSR4-206ENST00000460616 INPP5KQ9BT40 448 aa15.03■□□□□ -0
SSR4-206ENST00000460616 BEX2Q9BXY8 128 aa15.03■□□□□ -0
SSR4-206ENST00000460616 AASDHPPTQ9NRN7 309 aa15.03■□□□□ -0
SSR4-206ENST00000460616 FKBP14Q9NWM8 211 aa15.03■□□□□ -0
SSR4-206ENST00000460616 IPPQ9Y573 584 aa15.03■□□□□ -0
SSR4-206ENST00000460616 COMMD10Q9Y6G5 202 aa15.03■□□□□ -0
SSR4-206ENST00000460616 A0A075B6Q4 140 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PTGESO14684 152 aa15.03■□□□□ -0
SSR4-206ENST00000460616 CPNE3O75131 537 aaKnown RBP15.03■□□□□ -0
SSR4-206ENST00000460616 CD72P21854 359 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PKLRP30613 574 aa15.03■□□□□ -0
SSR4-206ENST00000460616 CDC42EP1Q00587 391 aa15.03■□□□□ -0
SSR4-206ENST00000460616 TP53BP2Q13625 1128 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PCBP1Q15365 356 aaKnown RBP eCLIP15.03■□□□□ -02e-6■■■□□ 17.3
SSR4-206ENST00000460616 BAK1Q16611 211 aa15.03■□□□□ -0
SSR4-206ENST00000460616 LRIF1Q5T3J3 769 aa15.03■□□□□ -0
SSR4-206ENST00000460616 SUSD1Q6UWL2 747 aa15.03■□□□□ -0
SSR4-206ENST00000460616 ANKRD46Q86W74 232 aa15.03■□□□□ -0
SSR4-206ENST00000460616 OR5H6Q8NGV6 325 aa15.03■□□□□ -0
SSR4-206ENST00000460616 TTC9Q92623 222 aa15.03■□□□□ -0
SSR4-206ENST00000460616 ROGDIQ9GZN7 287 aa15.03■□□□□ -0
SSR4-206ENST00000460616 TNKS2Q9H2K2 1166 aa15.03■□□□□ -0
SSR4-206ENST00000460616 C3orf14Q9HBI5 128 aa15.03■□□□□ -0
SSR4-206ENST00000460616 SARS2Q9NP81 518 aaKnown RBP15.03■□□□□ -0
SSR4-206ENST00000460616 SERHLQ9NQF3 203 aa15.03■□□□□ -0
SSR4-206ENST00000460616 FARSBQ9NSD9 589 aaKnown RBP15.03■□□□□ -0
SSR4-206ENST00000460616 OLA1Q9NTK5 396 aaKnown RBP15.03■□□□□ -0
SSR4-206ENST00000460616 NLE1Q9NVX2 485 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 NUDT4Q9NZJ9 180 aa15.03■□□□□ -0
SSR4-206ENST00000460616 UBA2Q9UBT2 640 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 RIMKLBQ9ULI2 386 aa15.03■□□□□ -0
SSR4-206ENST00000460616 ZNF490Q9ULM2 529 aaPredicted RBP15.03■□□□□ -0
SSR4-206ENST00000460616 NOD1Q9Y239 953 aa15.03■□□□□ -0
SSR4-206ENST00000460616 PDCD11Q14690 1871 aaKnown RBP15.02■□□□□ -0
SSR4-206ENST00000460616 A0A0X1KG70 313 aa15.02■□□□□ -0
SSR4-206ENST00000460616 E9PQ18 207 aa15.02■□□□□ -0
SSR4-206ENST00000460616 OR1I1O60431 355 aa15.02■□□□□ -0
SSR4-206ENST00000460616 M6PRP20645 277 aa15.02■□□□□ -0
SSR4-206ENST00000460616 PGFP49763 221 aa15.02■□□□□ -0
SSR4-206ENST00000460616 CD83Q01151 205 aa15.02■□□□□ -0
SSR4-206ENST00000460616 ST3GAL4Q11206 333 aa15.02■□□□□ -0
SSR4-206ENST00000460616 TRIM60Q495X7 471 aa15.02■□□□□ -0
SSR4-206ENST00000460616 SGO1Q5FBB7 561 aa15.02■□□□□ -0
SSR4-206ENST00000460616 ZMAT1Q5H9K5 638 aa15.02■□□□□ -0
SSR4-206ENST00000460616 DOK6Q6PKX4 331 aa15.02■□□□□ -0
SSR4-206ENST00000460616 GALNT10Q86SR1 603 aa15.02■□□□□ -0
SSR4-206ENST00000460616 FAM20CQ8IXL6 584 aa15.02■□□□□ -0
SSR4-206ENST00000460616 OR4K2Q8NGD2 314 aa15.02■□□□□ -0
SSR4-206ENST00000460616 CD200R1Q8TD46 325 aa15.02■□□□□ -0
SSR4-206ENST00000460616 CRELD1Q96HD1 420 aa15.02■□□□□ -0
SSR4-206ENST00000460616 MKRN2Q9H000 416 aaKnown RBP15.02■□□□□ -0
SSR4-206ENST00000460616 RPS6KA6Q9UK32 745 aa15.02■□□□□ -0
SSR4-206ENST00000460616 CCDC182A6NF36 153 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 EFCAB10A6NFE3 127 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 SLC28A1O00337 649 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 EPOP01588 193 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 S100A3P33764 101 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 THPOP40225 353 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 PIK3R6Q5UE93 754 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 AFTPHQ6ULP2 937 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 ZNF551Q7Z340 670 aaPredicted RBP15.02□□□□□ -0.01
SSR4-206ENST00000460616 DEPDC4Q8N2C3 294 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 FAM109AQ8N4B1 249 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 SNAPC3Q92966 411 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 RMDN1Q96DB5 314 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 C1orf74Q96LT6 269 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 ZNF717Q9BY31 904 aaPredicted RBP15.02□□□□□ -0.01
SSR4-206ENST00000460616 GABARAPL3Q9BY60 117 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 POLR1EQ9GZS1 481 aaKnown RBP15.02□□□□□ -0.01
SSR4-206ENST00000460616 LRTM1Q9HBL6 345 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 ASAH2Q9NR71 780 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 TSR3Q9UJK0 312 aaKnown RBP15.02□□□□□ -0.01
SSR4-206ENST00000460616 DNMT3LQ9UJW3 386 aa15.02□□□□□ -0.01
SSR4-206ENST00000460616 SCN5AQ14524 2016 aa15.01□□□□□ -0.01
SSR4-206ENST00000460616 PQBP1O60828 265 aaKnown RBP15.01□□□□□ -0.01
SSR4-206ENST00000460616 ULK1O75385 1050 aa15.01□□□□□ -0.01
SSR4-206ENST00000460616 C9P02748 559 aa15.01□□□□□ -0.01
SSR4-206ENST00000460616 UBL4AP11441 157 aa15.01□□□□□ -0.01
SSR4-206ENST00000460616 GGT2P36268 569 aa15.01□□□□□ -0.01
SSR4-206ENST00000460616 PBX3P40426 434 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms