RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GPRC5BQ9NZH0 403 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 SENP1Q9P0U3 644 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 GRID1Q9ULK0 1009 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 TNPO3Q9Y5L0 923 aaKnown RBP21.56■■□□□ 1.04
C9orf3-209ENST00000460573 ANKRD12Q6UB98 2062 aa21.56■■□□□ 1.04
C9orf3-209ENST00000460573 IGKV1-8A0A0C4DH67 115 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 COPEO14579 308 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 RGS16O15492 202 aaPredicted RBP21.55■■□□□ 1.04
C9orf3-209ENST00000460573 PRAMEF10O60809 474 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 EZRP15311 586 aaKnown RBP21.55■■□□□ 1.04
C9orf3-209ENST00000460573 TAC1P20366 129 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 CRHR1P34998 444 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 GABRA4P48169 554 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 YBX1P67809 324 aaKnown RBP21.55■■□□□ 1.04
C9orf3-209ENST00000460573 GPR19Q15760 415 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 PFKFB4Q16877 469 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 CEP85LQ5SZL2 805 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 PAQR7Q86WK9 346 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 DPH1Q9BZG8 443 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 PRORYQ9H606 182 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 APMAPQ9HDC9 416 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 DNAJC11Q9NVH1 559 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 TMEM216Q9P0N5 145 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 CPSF2Q9P2I0 782 aaKnown RBP21.55■■□□□ 1.04
C9orf3-209ENST00000460573 ACSL6Q9UKU0 697 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 B3GALT1Q9Y5Z6 326 aa21.55■■□□□ 1.04
C9orf3-209ENST00000460573 TMEM150CB9EJG8 249 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 C9orf172C9J069 976 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 H7BY64 318 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 SRPX2O60687 465 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-209ENST00000460573 GNAZP19086 355 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 SLC5A2P31639 672 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 GRK3P35626 688 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 GDF5P43026 501 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 HSPA7P48741 367 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 SETDB1Q15047 1291 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 C18orf21Q32NC0 220 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-209ENST00000460573 CCDC153Q494R4 210 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 RNF44Q7L0R7 432 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 LRRC70Q7Z2Q7 622 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 ADCK2Q7Z695 626 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 GPR135Q8IZ08 494 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 TMEM151AQ8N4L1 468 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 ABHD11Q8NFV4 315 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 SLC5A11Q8WWX8 675 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 PRAP1Q96NZ9 151 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 CTRCQ99895 268 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 ZFYVE21Q9BQ24 234 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 PELI2Q9HAT8 420 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 CUEDC1Q9NWM3 386 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-209ENST00000460573 MKS1Q9NXB0 559 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 PILRAQ9UKJ1 303 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 CELSR3Q9NYQ7 3312 aa21.54■■□□□ 1.04
C9orf3-209ENST00000460573 LAMA5O15230 3695 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 TEX51A0A1B0GUA7 166 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 FOXO6A8MYZ6 492 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 STX16-NPEPL1H3BU86 382 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 STX16O14662 325 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 CCNT2O60583 730 aaKnown RBP21.53■■□□□ 1.04
C9orf3-209ENST00000460573 CDH1P12830 882 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 H2AFXP16104 143 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-209ENST00000460573 CCR8P51685 355 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 ITGA1P56199 1179 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 CDC16Q13042 620 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 CASP8Q14790 479 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 PCBP2Q15366 365 aaKnown RBP eCLIP21.53■■□□□ 1.042e-6■■■□□ 16.2
C9orf3-209ENST00000460573 TCTE1Q5JU00 501 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 MCATQ8IVS2 390 aaKnown RBP21.53■■□□□ 1.04
C9orf3-209ENST00000460573 SRRM1Q8IYB3 904 aaKnown RBP21.53■■□□□ 1.04
C9orf3-209ENST00000460573 NEIL2Q969S2 332 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 RUFY1Q96T51 708 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 ENAMQ9NRM1 1142 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 OPTCQ9UBM4 332 aa21.53■■□□□ 1.04
C9orf3-209ENST00000460573 K7EPI3 171 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 TK2O00142 265 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 CLGNO14967 610 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 CTSVO60911 334 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 PDK4Q16654 411 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 ARHGAP40Q5TG30 622 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 FBXO42Q6P3S6 717 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 C4orf33Q8N1A6 199 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 TBC1D19Q8N5T2 526 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 OR4K1Q8NGD4 311 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 OR1L3Q8NH93 324 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 THAP11Q96EK4 314 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 PGM2Q96G03 612 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 SMC6Q96SB8 1091 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 IQCGQ9H095 443 aaKnown RBP21.52■■□□□ 1.04
C9orf3-209ENST00000460573 SH2B3Q9UQQ2 575 aa21.52■■□□□ 1.04
C9orf3-209ENST00000460573 A0A0J9YVX5 310 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 E7EQ34 232 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SNRNP200O75643 2136 aaKnown RBP21.51■■□□□ 1.03
C9orf3-209ENST00000460573 SBK3P0C264 359 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 MYZAPP0CAP1 466 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 PIK3CGP48736 1102 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 RPS15AP62244 130 aaKnown RBP21.51■■□□□ 1.03
C9orf3-209ENST00000460573 CSNK1G2P78368 415 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 DEFB110Q30KQ9 67 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 C16orf46Q6P387 395 aa21.51■■□□□ 1.03
C9orf3-209ENST00000460573 TLDC1Q6P9B6 456 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms