RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 OAFQ86UD1 273 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CADM2Q8N3J6 435 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CHCHD4Q8N4Q1 142 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PIK3R3Q92569 461 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 OMA1Q96E52 524 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 L3HYPDHQ96EM0 354 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 KCNH6Q9H252 994 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 EURLQ9NYK6 297 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 UBE2QL1A1L167 161 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 SNX4O95219 450 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CSNK2A2P19784 350 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 RPS13P62277 151 aaKnown RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 RAPSNQ13702 412 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 KCNC3Q14003 757 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 NDUFA9Q16795 377 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CRB2Q5IJ48 1285 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 LY6G5CQ5SRR4 150 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TMIGD1Q6UXZ0 262 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 KBTBD6Q86V97 674 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 SORT1Q99523 831 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PKP4Q99569 1192 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 OR51B5Q9H339 312 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TAC3Q9UHF0 121 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF222Q9UK12 451 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PCDHB3Q9Y5E6 796 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TBX1O43435 398 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 AOC2O75106 756 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 EEDO75530 441 aaKnown RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 DHFRP00374 187 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 ATG9BQ674R7 924 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TRNP1Q6NT89 227 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TMC8Q8IU68 726 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 TAMM41Q96BW9 452 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 IL4I1Q96RQ9 567 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 IGSF5Q9NSI5 407 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 P2RX2Q9UBL9 471 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 MRTO4Q9UKD2 239 aaKnown RBP14.35□□□□□ -0.11
PTPRU-205ENST00000460170 HEBP2Q9Y5Z4 205 aa14.35□□□□□ -0.11
PTPRU-205ENST00000460170 PREPP48147 710 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CLCNKAP51800 687 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 XKP51811 444 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 LRRC32Q14392 662 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 MUS81Q96NY9 551 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TRIB3Q96RU7 358 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 LRRC72A6NJI9 287 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 H0YAE9 185 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CLDN4O14493 209 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SNAP29O95721 258 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ALPPP05187 535 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CHRM5P08912 532 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 PABPC4LP0CB38 370 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 RYKP34925 604 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SEC13P55735 322 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 RAB25P57735 213 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TAS2R50P59544 299 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 PCDH1Q08174 1060 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CRTC2Q53ET0 693 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 RTP2Q5QGT7 225 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 NOXRED1Q6NXP6 359 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 GOLM1Q8NBJ4 401 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 A0A1W2PPW3 197 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 H0YJX3 145 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 HMGCLP35914 325 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TUBA3CQ13748 450 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF630Q2M218 657 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CLIP4Q8N3C7 705 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CELF5Q8N6W0 485 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 NFKBIDQ8NI38 313 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 RBM18Q96H35 190 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 KCNS3Q9BQ31 491 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SMG9Q9H0W8 520 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 DUXAA6NLW8 204 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 DENRO43583 198 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 H1F0P07305 194 aaKnown RBP14.34□□□□□ -0.11
PTPRU-205ENST00000460170 C7P10643 843 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ACRV1P26436 265 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 BNC1Q01954 994 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TEAD2Q15562 447 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ZNF789Q5FWF6 425 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 COQ5Q5HYK3 327 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SLC5A11Q8WWX8 675 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SCAMP4Q969E2 229 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 S100A13Q99584 98 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 DCSTAMPQ9H295 470 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 SNTG1Q9NSN8 517 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 CFL2Q9Y281 166 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ANKRD36CQ5JPF3 1778 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 GLDCP23378 1020 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 LMAN2Q12907 356 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TMEM44Q2T9K0 475 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 PKDCCQ504Y2 493 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 TAF8Q7Z7C8 310 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 ZFAND4Q86XD8 727 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 GPR135Q8IZ08 494 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 OR52B6Q8NGF0 335 aa14.34□□□□□ -0.11
PTPRU-205ENST00000460170 C11orf24Q96F05 449 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms