RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ZBTB14O43829 449 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 DDAH2O95865 285 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 SYF2O95926 243 aaKnown RBP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 SKIV2L2P42285 1042 aaKnown RBP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 LRRC8EQ6NSJ5 796 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 PARP9Q8IXQ6 854 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 PPIL6Q8IXY8 311 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 ACTRT1Q8TDG2 376 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 THOC3Q96J01 351 aaKnown RBP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 SIGLEC10Q96LC7 697 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 EBNA1BP2Q99848 306 aaKnown RBP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 SYNPO2LQ9H987 977 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 PLEKHB1Q9UF11 243 aaPredicted RBP21.68■■□□□ 1.06
PTPN4-207ENST00000460162 PCYOX1Q9UHG3 505 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 FBXO5Q9UKT4 447 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 CSAG2Q9Y5P2 127 aa21.68■■□□□ 1.06
PTPN4-207ENST00000460162 UNC79Q9P2D8 2635 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 A0A1W2PQ72 361 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 PCDH17O14917 1159 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 CBX6O95503 412 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 TSFMP43897 325 aaKnown RBP21.67■■□□□ 1.06
PTPN4-207ENST00000460162 MPP1Q00013 466 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 Q0VFX4 171 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 HIF1AQ16665 826 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 HKDC1Q2TB90 917 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 VWA2Q5GFL6 755 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 B3GNTL1Q67FW5 361 aaPredicted RBP21.67■■□□□ 1.06
PTPN4-207ENST00000460162 LRRC56Q8IYG6 542 aaPredicted RBP21.67■■□□□ 1.06
PTPN4-207ENST00000460162 CPNE9Q8IYJ1 553 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 PRSS58Q8IYP2 241 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 PRR7Q8TB68 274 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 DRC3Q9H069 523 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 AGPAT4Q9NRZ5 378 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 STOX2Q9P2F5 926 aaPredicted RBP21.67■■□□□ 1.06
PTPN4-207ENST00000460162 TRPC4Q9UBN4 977 aa21.67■■□□□ 1.06
PTPN4-207ENST00000460162 NBPF19A0A087WUL8 3843 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ANXA5P08758 320 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 RNF224P0DH78 156 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 PGAM1P18669 254 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 IMPA1P29218 277 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 GLRBP48167 497 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 PTK6Q13882 451 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 RNASEH2BQ5TBB1 312 aaKnown RBP21.66■■□□□ 1.06
PTPN4-207ENST00000460162 THEMIS2Q5TEJ8 643 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ATG9BQ674R7 924 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ISLR2Q6UXK2 745 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 PIWIL4Q7Z3Z4 852 aaKnown RBP21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ADCK2Q7Z695 626 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 KCNMB4Q86W47 210 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ARHGEF39Q8N4T4 335 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 AMER3Q8N944 861 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 OSBPL9Q96SU4 736 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 AARSD1Q9BTE6 412 aaKnown RBP21.66■■□□□ 1.06
PTPN4-207ENST00000460162 ZNF160Q9HCG1 818 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 MKKSQ9NPJ1 570 aaPredicted RBP21.66■■□□□ 1.06
PTPN4-207ENST00000460162 NTNG1Q9Y2I2 539 aa21.66■■□□□ 1.06
PTPN4-207ENST00000460162 CNTRLQ7Z7A1 2325 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 ANKUB1A6NFN9 424 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 IDSB3KWA1 339 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 HAT1O14929 419 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 COX6A1P12074 109 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 FDXRP22570 491 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 SLC26A3P40879 764 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 MFAP5Q13361 173 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 ELOAQ14241 798 aaKnown RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 CRYMQ14894 314 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 ZNF169Q14929 603 aaPredicted RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 HSP90AA5PQ58FG0 334 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 CYHR1Q6ZMK1 362 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 UBE2R2Q712K3 238 aaPredicted RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 GABPB2Q8TAK5 448 aaPredicted RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 DNAJB14Q8TBM8 379 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 C8orf44Q96CB5 159 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 MESP1Q9BRJ9 268 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 TGIF2Q9GZN2 237 aa21.65■■□□□ 1.06
PTPN4-207ENST00000460162 CCDC177Q9NQR7 707 aaPredicted RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 TRMT6Q9UJA5 497 aaKnown RBP21.65■■□□□ 1.06
PTPN4-207ENST00000460162 NSG1A0A0A6YYJ2 146 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 CES2O00748 559 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 HAUS5O94927 633 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 HRH2P25021 359 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 CXCR2P25025 360 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 EMP2P54851 167 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 TBPL1P62380 186 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 SP140Q13342 867 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 FAM53BQ14153 422 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 TLR1Q15399 786 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 PPP1R7Q15435 360 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 NDUFA9Q16795 377 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 UGT3A1Q6NUS8 523 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 NDUFAF7Q7L592 441 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 KBTBD2Q8IY47 623 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 SLC35F6Q8N357 371 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 MMABQ96EY8 250 aaPredicted RBP21.64■■□□□ 1.05
PTPN4-207ENST00000460162 CNDP1Q96KN2 507 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 ABCF3Q9NUQ8 709 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 CPAMD8Q8IZJ3 1885 aa21.64■■□□□ 1.05
PTPN4-207ENST00000460162 P2RX6O15547 441 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 FOXS1O43638 330 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms