RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 MCM3APO60318 1980 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 GABRDO14764 452 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ITGB1P05556 798 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SLC1A2P43004 574 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 GLUD2P49448 558 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CDKL1Q00532 357 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 TDGQ13569 410 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 TCEAL1Q15170 157 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ANKDD1AQ495B1 522 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ATXN7L2Q5T6C5 722 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 FAM198BQ6UWH4 519 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 DET1Q7L5Y6 550 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 MRPL10Q7Z7H8 261 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 SIMC1Q8NDZ2 872 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 HEPHQ9BQS7 1158 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 TTPALQ9BTX7 342 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 SMURF1Q9HCE7 757 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ANKMY1Q9P2S6 941 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SYN3O14994 580 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ACSL4O60488 711 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 MYF6P23409 242 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SMSP52788 366 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 WDR5P61964 334 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 CPSF6Q16630 551 aaKnown RBP eCLIP9.51□□□□□ -0.89
UFD1-205ENST00000459854 AMHR2Q16671 573 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CDKL4Q5MAI5 379 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CAPN13Q6MZZ7 669 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 CARM1Q86X55 608 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 TOP6BLQ8N6T0 577 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 RPLP0P6Q8NHW5 317 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 PSKH2Q96QS6 385 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ULBP1Q9BZM6 244 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ENAMQ9NRM1 1142 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CDH10Q9Y6N8 788 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 OR6C75A6NL08 312 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 KAT7O95251 611 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 IGFBP4P22692 258 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CHMP24386 653 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 HOXA11P31270 313 aaPredicted RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 EPHB3P54753 998 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 SNRPD1P62314 119 aaKnown RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 RPL7AP62424 266 aaKnown RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 SLC3A1Q07837 685 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 TSTQ16762 297 aaKnown RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 FRRS1Q6ZNA5 592 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 GDPGP1Q6ZNW5 385 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RNF44Q7L0R7 432 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ASRGL1Q7L266 308 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 OR4C6Q8NH72 309 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PRICKLE1Q96MT3 831 aaPredicted RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 PCDHB18PQ96TA0 734 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CGREF1Q99674 301 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PBDC1Q9BVG4 233 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ASB3Q9Y575 518 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PIP5K1BO14986 540 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 NOBOXO60393 691 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 GOT1P17174 413 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 XKP51811 444 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ARSFP54793 590 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 AP1S1P61966 158 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RPS14P62263 151 aaKnown RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 HERVK_113P63132 956 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 SMARCB1Q12824 385 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 NFATC3Q12968 1075 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 COL28A1Q2UY09 1125 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 SLC9B1Q4ZJI4 515 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RNASE12Q5GAN4 147 aaKnown RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 PITRM1Q5JRX3 1037 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 HACD4Q5VWC8 232 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 TAS1R3Q7RTX0 852 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 WDR53Q7Z5U6 358 aaPredicted RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 CIR1Q86X95 450 aaPredicted RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 OR7G1Q8NGA0 311 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 FBXL18Q96ME1 805 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ERVK-6Q9BXR3 956 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 MTG2Q9H4K7 406 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RGCCQ9H4X1 137 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CCM2LQ9NUG4 571 aaPredicted RBP9.5□□□□□ -0.89
UFD1-205ENST00000459854 ST14Q9Y5Y6 855 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 FAM159BA6NKW6 160 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 TRIM23P36406 574 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 VAMP2P63027 116 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 DSG2Q14126 1118 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 LGI2Q8N0V4 545 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 DEDD2Q8WXF8 326 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 FN3KQ9H479 309 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RETREG1Q9H6L5 497 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PADI2Q9Y2J8 665 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 RLFQ13129 1914 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 XKRYO14609 159 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CDRT1O95170 752 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CXCL10P02778 98 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PRPS1L1P21108 318 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 CDKN2CP42773 168 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 ALDH3B2P48448 385 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 PRKAG1P54619 331 aa9.5□□□□□ -0.89
UFD1-205ENST00000459854 SETMARQ53H47 684 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms