RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 PROX1Q92786 737 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 SCAMP4Q969E2 229 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 ZNF566Q969W8 418 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 COPS8Q99627 209 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 MIR1-1HGQ9H1L0 117 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 TM9SF3Q9HD45 589 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.7□□□□□ -0.22
SCFD1-203ENST00000458591 SNX6Q9UNH7 406 aa13.7□□□□□ -0.22
SCFD1-203ENST00000458591 SAMD4AQ9UPU9 718 aaKnown RBP13.7□□□□□ -0.22
SCFD1-203ENST00000458591 EVPLLA8MZ36 301 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 SLC22A1O15245 554 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 PRPS2P11908 318 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 COX7A2P14406 83 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 MAGP20916 626 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ELAVL2Q12926 359 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 IL18R1Q13478 541 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 DUOXA1Q1HG43 343 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TTLL9Q3SXZ7 439 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ZC3H12BQ5HYM0 836 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 CMTM7Q96FZ5 175 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 CEP295NLQ96MC4 621 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 RETREG1Q9H6L5 497 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ZBTB20Q9HC78 741 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 THUMPD1Q9NXG2 353 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ZDHHC3Q9NYG2 299 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 KIF17Q9P2E2 1029 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 NDRG4Q9ULP0 352 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 SLC6A14Q9UN76 642 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TPRKBQ9Y3C4 175 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 KDM1AO60341 852 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 SEMG1P04279 462 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ABCB1P08183 1280 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 CD36P16671 472 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 JUNDP17535 347 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 DNAJA1P31689 397 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TGFBR2P37173 567 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 LIPAP38571 399 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 SLC6A12P48065 614 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ALDH7A1P49419 539 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 NUDT6P53370 316 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 PFN3P60673 137 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ACOX1Q15067 660 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 RFX4Q33E94 735 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 IQCCQ4KMZ1 466 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 CCDC92Q53HC0 331 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 FRG2Q64ET8 278 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TSEN54Q7Z6J9 526 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ENTHD1Q8IYW4 607 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 CRIPAKQ8N1N5 446 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 OR52J3Q8NH60 311 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 NELL1Q92832 810 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TESCQ96BS2 214 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 LGALS12Q96DT0 336 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 FRG2BQ96QU4 278 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 TMEM121BQ9BXQ6 578 aaPredicted RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 ELAC1Q9H777 363 aaKnown RBP13.69□□□□□ -0.22
SCFD1-203ENST00000458591 STOML2Q9UJZ1 356 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 PCDHGB1Q9Y5G3 927 aa13.69□□□□□ -0.22
SCFD1-203ENST00000458591 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 TMEM229AB2RXF0 380 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 E7EQ34 232 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 RGS10O43665 173 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 GBAP04062 536 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 C1SP09871 688 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 GRK5P34947 590 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SLC19A1P41440 591 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 DGKEP52429 567 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 CRISP3P54108 245 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 ABRQ12979 859 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SLC13A2Q13183 592 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 DGUOKQ16854 277 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SYT6Q5T7P8 510 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-203ENST00000458591 RETSATQ6NUM9 610 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 DEFB128Q7Z7B8 93 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 PSD4Q8NDX1 1056 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 OVCA2Q8WZ82 227 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SAMD11Q96NU1 681 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 C2orf49Q9BVC5 232 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SLC12A9Q9BXP2 914 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 GABARAPL1Q9H0R8 117 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 RLIMQ9NVW2 624 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 AP3M1Q9Y2T2 418 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 TESMINQ9Y4I5 508 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
SCFD1-203ENST00000458591 OR2AG2A6NM03 316 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 GFRA2O00451 464 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 PRRG1O14668 218 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 HIST1H2AGP0C0S8 130 aaPredicted RBP13.68□□□□□ -0.22
SCFD1-203ENST00000458591 HOXB6P17509 224 aaKnown RBP13.68□□□□□ -0.22
SCFD1-203ENST00000458591 HIST1H2ADP20671 130 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 FPR1P21462 350 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 TGM1P22735 817 aa13.68□□□□□ -0.22
SCFD1-203ENST00000458591 OR1E2P47887 323 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms