RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 C6orf106Q9H6K1 298 aaPredicted RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 AKTIPQ9H8T0 292 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 TMEM9BQ9NQ34 198 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 NMRK1Q9NWW6 199 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 NOP53Q9NZM5 478 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 SLC23A2Q9UGH3 650 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ZNF225Q9UK10 706 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 KLK13Q9UKR3 277 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 KCNK6Q9Y257 313 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 EIF3LQ9Y262 564 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 TDRKHQ9Y2W6 561 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 PCDHGA11Q9Y5H2 935 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 COPG1Q9Y678 874 aaKnown RBP8.65□□□□□ -1.02
VPS50-207ENST00000458530 DGKBQ9Y6T7 804 aa8.65□□□□□ -1.02
VPS50-207ENST00000458530 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.03
VPS50-207ENST00000458530 ATP6AP2A0A1C7CYW4 349 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 OR5K4A6NMS3 321 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 MEI4A8MW99 385 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 B2RBV5 119 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 H0YIV9 168 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 HYAL3O43820 417 aaPredicted RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 ATP6AP2O75787 350 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 RSL1D1O76021 490 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 PRR35P0CG20 571 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 T-ENOLP0DO92 83 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 MTHFD1P11586 935 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 ACPPP15309 386 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 CXCR2P25025 360 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 CD27P26842 260 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 SERPINB1P30740 379 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 CASP2P42575 452 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 RAB28P51157 221 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 EMX2Q04743 252 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TSTA3Q13630 321 aaPredicted RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS50-207ENST00000458530 SPRED3Q2MJR0 410 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PDCD4Q53EL6 469 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 C6orf163Q5TEZ5 329 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 CACHD1Q5VU97 1274 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 FRG2Q64ET8 278 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 Q6ZSR6 202 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 C11orf74Q86VG3 221 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 IQCHQ86VS3 1027 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 C17orf64Q86WR6 236 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PHACTR4Q8IZ21 702 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 KRT78Q8N1N4 520 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TBC1D19Q8N5T2 526 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 FNDC5Q8NAU1 212 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 OR5AR1Q8NGP9 310 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TSPEARQ8WU66 669 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 OR1E3Q8WZA6 343 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 SH3KBP1Q96B97 665 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PYCR2Q96C36 320 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 BIRC7Q96CA5 298 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 KLHDC7BQ96G42 594 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PDXPQ96GD0 296 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PRR11Q96HE9 360 aaPredicted RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 BMFQ96LC9 184 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 FRG2BQ96QU4 278 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 FERD3LQ96RJ6 166 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ZBTB18Q99592 522 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 MRPL1Q9BYD6 325 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 TPSD1Q9BZJ3 242 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PITHD1Q9GZP4 211 aaPredicted RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 TUBB1Q9H4B7 451 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 EFCAB1Q9HAE3 211 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 BRF2Q9HAW0 419 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PRM3Q9NNZ6 103 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 CD93Q9NPY3 652 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 AASDHPPTQ9NRN7 309 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 IMP3Q9NV31 184 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 AIG1Q9NVV5 245 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ASIC5Q9NY37 505 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ZIM2Q9NZV7 527 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ADGRE2Q9UHX3 823 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 PCOLCE2Q9UKZ9 415 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 G3BP2Q9UN86 482 aaKnown RBP8.64□□□□□ -1.03
VPS50-207ENST00000458530 PSMD13Q9UNM6 376 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 MAPRE3Q9UPY8 281 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TMED5Q9Y3A6 229 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 RNF11Q9Y3C5 154 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ST14Q9Y5Y6 855 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 HEATR5BQ9P2D3 2071 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 ASXL3Q9C0F0 2248 aa8.64□□□□□ -1.03
VPS50-207ENST00000458530 TDRD6O60522 2096 aaKnown RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 ARHGEF17Q96PE2 2063 aaPredicted RBP8.63□□□□□ -1.03
VPS50-207ENST00000458530 KCNE1BA0A087WTH5 132 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PRR19A6NJB7 356 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 METTL12A8MUP2 240 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 PATE3B3GLJ2 98 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 E7ENX8 843 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 E7EQ34 232 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 NPIPB8E9PQR5 432 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 H0Y8X5 98 aa8.63□□□□□ -1.03
VPS50-207ENST00000458530 FFAR3O14843 346 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms