RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 CSNK1G2P78368 415 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 MAP7Q14244 749 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 PFKFB4Q16877 469 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 BEND6Q5SZJ8 279 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-206ENST00000457662 DTX1Q86Y01 620 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 OR4K1Q8NGD4 311 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 NEIL2Q969S2 332 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 ESAMQ96AP7 390 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 ZNF285Q96NJ3 590 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 DPH1Q9BZG8 443 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 SPRTNQ9H040 489 aaPredicted RBP17.43■□□□□ 0.38
TRIM13-206ENST00000457662 ENAMQ9NRM1 1142 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 IRAK4Q9NWZ3 460 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 GPRC5BQ9NZH0 403 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 CPSF2Q9P2I0 782 aaKnown RBP17.43■□□□□ 0.38
TRIM13-206ENST00000457662 XPR1Q9UBH6 696 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 SH2B3Q9UQQ2 575 aa17.43■□□□□ 0.38
TRIM13-206ENST00000457662 TNPO3Q9Y5L0 923 aaKnown RBP17.43■□□□□ 0.38
TRIM13-206ENST00000457662 H3BMH7 237 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 NRP2O60462 931 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 CPNE3O75131 537 aaKnown RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 SMIM24O75264 130 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 DLGAP3O95886 979 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 NTRK1P04629 796 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 EIF2S3P41091 472 aaKnown RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 RPS15AP62244 130 aaKnown RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 CDC16Q13042 620 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 SETDB1Q15047 1291 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 FBXO48Q5FWF7 155 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 METTL2BQ6P1Q9 378 aaKnown RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 NXPE4Q6UWF7 544 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 C6orf15Q6UXA7 325 aaPredicted RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 CROCCP2Q86T23 111 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 NLGN4XQ8N0W4 816 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 NLGN4YQ8NFZ3 816 aaPredicted RBP17.42■□□□□ 0.38
TRIM13-206ENST00000457662 UBTD2Q8WUN7 234 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 KCNE4Q8WWG9 221 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 THAP11Q96EK4 314 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 OR2A5Q96R48 311 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 SLC7A5P2Q9GIP4 190 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 PELI2Q9HAT8 420 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 TMEM216Q9P0N5 145 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 RAXQ9Y2V3 346 aa17.42■□□□□ 0.38
TRIM13-206ENST00000457662 IGF2RP11717 2491 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 SDK2Q58EX2 2172 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 KCNE1BA0A087WTH5 132 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 FOXO6A8MYZ6 492 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 H0YGG7 62 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 K7EPI3 171 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 HAT1O14929 419 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 ZSCAN9O15535 394 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 ZNF749O43361 778 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 CCNT2O60583 730 aaKnown RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 RAD1O60671 282 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 GLRA3O75311 464 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 H2AFYO75367 372 aaKnown RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 CCNYL3P0C7X3 344 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 KRT4P19013 534 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 VSX2P58304 361 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 ARF3P61204 181 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 GRM7Q14831 915 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 KRT71Q3SY84 523 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 WASHC2DQ5SRD0 308 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 CATSPEREQ5SY80 951 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 YOD1Q5VVQ6 348 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 FRMPD2BQ6IN97 320 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 LRRC70Q7Z2Q7 622 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 TIPARPQ7Z3E1 657 aaKnown RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 TMEM151AQ8N4L1 468 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 TBC1D19Q8N5T2 526 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 ESX1Q8N693 406 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 SNX31Q8N9S9 440 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 MYRIPQ8NFW9 859 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 RERGQ96A58 199 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 LRFN5Q96NI6 719 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 SARGQ9BW04 601 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 ACTR5Q9H9F9 607 aaPredicted RBP17.41■□□□□ 0.38
TRIM13-206ENST00000457662 OPTCQ9UBM4 332 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 GRID1Q9ULK0 1009 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 SRPK3Q9UPE1 567 aa17.41■□□□□ 0.38
TRIM13-206ENST00000457662 SEC16AO15027 2179 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 LOC105369274A0A096LPK9 316 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 LOC102723532A0A0G2JNH3 316 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 TK2O00142 265 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 TXNDC9O14530 226 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 CLGNO14967 610 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 KLK3P07288 261 aaPredicted RBP17.4■□□□□ 0.38
TRIM13-206ENST00000457662 CTSBP07858 339 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 C1GALT1C1LP0DN25 315 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 TAC1P20366 129 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 CXCR2P25025 360 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 CRHR1P34998 444 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 AGTR2P50052 363 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 ATP1A2P50993 1020 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 ARSFP54793 590 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 SLC18A2Q05940 514 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 ZNF844Q08AG5 666 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 PCBP2Q15366 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
TRIM13-206ENST00000457662 PDK4Q16654 411 aa17.4■□□□□ 0.38
TRIM13-206ENST00000457662 FAM214AQ32MH5 1076 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms