RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 SCAMP5Q8TAC9 235 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 ST7LQ8TDW4 575 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 C1orf54Q8WWF1 131 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 ATG4AQ8WYN0 398 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 CLP1Q92989 425 aaKnown RBP6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 RNF157Q96PX1 679 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 TRIM56Q9BRZ2 755 aaKnown RBP6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 C2orf88Q9BSF0 95 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 TRIM51Q9BSJ1 452 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 MED18Q9BUE0 208 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 TTLL2Q9BWV7 592 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 MMP27Q9H306 513 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 CRISPLD1Q9H336 500 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 OPA3Q9H6K4 179 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 SLCO1B3Q9NPD5 702 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 DUSP22Q9NRW4 184 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 NKIRAS2Q9NYR9 191 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 GIMAP2Q9UG22 337 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 FBXL21Q9UKT6 434 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 TMPRSS11EQ9UL52 423 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 FZD10Q9ULW2 581 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 DRG1Q9Y295 367 aaKnown RBP6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 RNF215Q9Y6U7 377 aa6.65□□□□□ -1.34
CUBNP3-201ENST00000457461 MYO18AQ92614 2054 aaKnown RBP6.65□□□□□ -1.35
CUBNP3-201ENST00000457461 WDR27A2RRH5 827 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 A8MXE2 369 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 M0QYT0 321 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PHYHO14832 338 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TP73O15350 636 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 RGS5O15539 181 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PHGDHO43175 533 aaKnown RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ADAM12O43184 909 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 UGDHO60701 494 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ABLIM3O94929 683 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 RAB3DO95716 219 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 F9P00740 461 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ENO1P06733 434 aaKnown RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FCER2P06734 321 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ITGAVP06756 1048 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 EPB42P16452 691 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 MATN1P21941 496 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 IVDP26440 423 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PTBP1P26599 531 aaKnown RBP eCLIP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 KLRC2P26717 231 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 MSX1P28360 303 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 GPC1P35052 558 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 GPX4P36969 197 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 KCNJ1P48048 391 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CXCR3P49682 368 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 MLLT10P55197 1068 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 NME5P56597 212 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 GLO1Q04760 184 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PRKCDQ05655 676 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FPGSQ05932 587 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TFDP2Q14188 446 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SMCO1Q147U7 214 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 NOMO1Q15155 1222 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 LLGL1Q15334 1064 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SWI5Q1ZZU3 235 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 GPAT3Q53EU6 434 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 NHSL2Q5HYW2 709 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CDKL4Q5MAI5 379 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TMEM240Q5SV17 173 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 MROH9Q5TGP6 573 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 DESI1Q6ICB0 168 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PSRC1Q6PGN9 363 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TTC33Q6PID6 262 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 RHBDF2Q6PJF5 856 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PRSS55Q6UWB4 352 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CHSY3Q70JA7 882 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PGAP1Q75T13 922 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PDZD4Q76G19 769 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 EFL1Q7Z2Z2 1120 aaKnown RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SCD5Q86SK9 330 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CCDC105Q8IYK2 499 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CENPLQ8N0S6 344 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TTC9BQ8N6N2 239 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 KCTD6Q8NC69 237 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 RP9Q8TA86 221 aaKnown RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FAM216AQ8WUB2 273 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ASB12Q8WXK4 309 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SLC7A6Q92536 515 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PROX1Q92786 737 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FAM122AQ96E09 287 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ELP4Q96EB1 424 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SIGLEC10Q96LC7 697 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CAMK1GQ96NX5 476 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FAM111AQ96PZ2 611 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 KCTD15Q96SI1 283 aaPredicted RBP6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 PDCD10Q9BUL8 212 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 DUSP26Q9BV47 211 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 ACPTQ9BZG2 426 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 GPR63Q9BZJ6 419 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 TRIM2Q9C040 744 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 RHBGQ9H310 441 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 SMOC2Q9H3U7 446 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 FBXO44Q9H4M3 255 aa6.64□□□□□ -1.35
CUBNP3-201ENST00000457461 MANSC1Q9H8J5 431 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms