RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CUEDC1Q9NWM3 386 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-215ENST00000456545 CDC14AQ9UNH5 594 aa17.28■□□□□ 0.36
PDLIM2-215ENST00000456545 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
PDLIM2-215ENST00000456545 IGKV1-8A0A0C4DH67 115 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 HAT1O14929 419 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 PHGDHO43175 533 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 CCDC166P0CW27 439 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 OTX2P32243 289 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 NFKB2Q00653 900 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 RELAQ04206 551 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 IL10RAQ13651 578 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 SSPNQ14714 243 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 SLMAPQ14BN4 828 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 UAP1Q16222 522 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 FAM69BQ5VUD6 431 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 ADAMTSL2Q86TH1 951 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 PLD3Q8IV08 490 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 TBC1D19Q8N5T2 526 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 METTL27Q8N6F8 245 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 ANKRD49Q8WVL7 239 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 PYCR2Q96C36 320 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 FMO2Q99518 471 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 GPR22Q99680 433 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 ZNF304Q9HCX3 659 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 ACSS2Q9NR19 701 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 TLK1Q9UKI8 766 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 DYRK1BQ9Y463 629 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 MAU2Q9Y6X3 613 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 ZFYVE26Q68DK2 2539 aa17.27■□□□□ 0.36
PDLIM2-215ENST00000456545 FITM1A5D6W6 292 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 ARGFXA6NJG6 315 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 MKRN2OSH3BPM6 223 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 FAM155BO75949 473 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 OR1D4P47884 311 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 RAB10P61026 200 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 RPS15AP62244 130 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 NFATC3Q12968 1075 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 CSHL1Q14406 222 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 NDUFA9Q16795 377 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 SBSNQ6UWP8 590 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 OVCH1Q7RTY7 1134 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 ZNF843Q8N446 348 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 PTERQ96BW5 349 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 OR2A5Q96R48 311 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 CYTH2Q99418 400 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 MCMBPQ9BTE3 642 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 SGPP1Q9BX95 441 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 UNKQ9C0B0 810 aaKnown RBP17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 DERL2Q9GZP9 239 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 SLC25A18Q9H1K4 315 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 TUBD1Q9UJT1 453 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 OARD1Q9Y530 152 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 HEMK1Q9Y5R4 338 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 CACNA1GO43497 2377 aa17.26■□□□□ 0.35
PDLIM2-215ENST00000456545 SEC16AO15027 2179 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 PEX12O00623 359 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 PRPF4O43172 522 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 RFPL1O75677 317 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 CDH1P12830 882 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 NPPBP16860 134 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 CCR8P51685 355 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 ATP6V0D1P61421 351 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 OCA2Q04671 838 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 PRMT9Q6P2P2 845 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 IFT20Q8IY31 132 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 SPATA6LQ8N4H0 392 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 OR56A3Q8NH54 315 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 C9orf43Q8TAL5 461 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 FKBP10Q96AY3 582 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 IP6K3Q96PC2 410 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 NINJ2Q9NZG7 142 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 IKZF3Q9UKT9 509 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 G3BP2Q9UN86 482 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 RUVBL1Q9Y265 456 aaKnown RBP17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 IKBKGQ9Y6K9 419 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 HEATR5BQ9P2D3 2071 aa17.25■□□□□ 0.35
PDLIM2-215ENST00000456545 NCF1BA6NI72 391 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 NCF1CA8MVU1 366 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ALBP02768 609 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 S100BP04271 92 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 NCF1P14598 390 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 FBLP22087 321 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 CRABP2P29373 138 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 GCGRP47871 477 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 HNMTP50135 292 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 CCL11P51671 97 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 PMS2P54278 862 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 EMP3P54852 163 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 RRADP55042 308 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 CSNK1G2P78368 415 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 CDKL1Q00532 357 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 EFTUD2Q15029 972 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 HKDC1Q2TB90 917 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 PRTGQ2VWP7 1150 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 GARNL3Q5VVW2 1013 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 ZNF605Q86T29 641 aa17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 TBC1D1Q86TI0 1168 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-215ENST00000456545 THOC6Q86W42 341 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms