RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CD1DP15813 335 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ATF4P18848 351 aaPredicted RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CTSKP43235 329 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CRYBB2P43320 205 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 RGRP47804 291 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 IL18R1Q13478 541 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 ABRAXAS2Q15018 415 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 KIF19Q2TAC6 998 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GOLGA7BQ2TAP0 167 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 XKR3Q5GH77 459 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM255AQ5JRV8 349 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CFAP77Q6ZQR2 320 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CILP2Q8IUL8 1156 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAJC22Q8N4W6 341 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 AFG1LQ8WV93 481 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GIMAP1Q8WWP7 306 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GPRASP2Q96D09 838 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CCDC126Q96EE4 140 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 CYYR1Q96J86 154 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 OPALINQ96PE5 141 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 BCL2L14Q9BZR8 327 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 BRINP2Q9C0B6 783 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 WDR13Q9H1Z4 485 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 MPP6Q9NZW5 540 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 GMPPBQ9Y5P6 360 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 AUP1Q9Y679 476 aa4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 PHF3Q92576 2039 aaKnown RBP4.4□□□□□ -1.7
DEPDC1-202ENST00000456315 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MYBPHLA2RUH7 354 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 CLDN24A6NM45 220 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 POM121CA8CG34 1229 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 KPNA7A9QM74 516 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 BCKDKO14874 412 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 B4GALT3O60512 393 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MAFKO60675 156 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 RNGTTO60942 597 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TOXO94900 526 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SNX4O95219 450 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 VTNP04004 478 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 RAP2AP10114 183 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 STX1BP61266 288 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SNRPFP62306 86 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 IFRD2Q12894 506 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 DUSP4Q13115 394 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 FADDQ13158 208 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 EIF4EBP2Q13542 120 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ZBTB6Q15916 424 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 VASNQ6EMK4 673 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MAMSTRQ6ZN01 415 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TMPRSS9Q7Z410 1059 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 NIM1KQ8IY84 436 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 OR4N4Q8N0Y3 316 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 LMNTD1Q8N9Z9 388 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ZC3H10Q96K80 434 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ZFP42Q96MM3 310 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 HOPXQ9BPY8 73 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ASPSCR1Q9BZE9 553 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 FNIP2Q9P278 1114 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 VTI1BQ9UEU0 232 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 PCOLCE2Q9UKZ9 415 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 PPT2Q9UMR5 302 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TIMM13Q9Y5L4 95 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SPTBN1Q01082 2364 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SAGE2PA6NJ88 616 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 M0QYT0 321 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TSPAN4O14817 238 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 HLA-DOAP06340 250 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SUPT20HL2P0C7V6 817 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 STAG3L1P0CL83 205 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 BPIP17213 487 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 PTPRAP18433 802 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 RYKP34925 604 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MATKP42679 507 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 POLR2GP62487 172 aaKnown RBP eCLIP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ST3GAL4Q11206 333 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SUPT20HL1Q3ZLR7 823 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 RBM48Q5RL73 367 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TTC23Q5W5X9 447 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 CAPN13Q6MZZ7 669 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TAF2Q6P1X5 1199 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM83AQ86UY5 434 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 DNAJC5GQ8N7S2 189 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 TMEM145Q8NBT3 493 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SCAMP5Q8TAC9 235 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 FAM193BQ96PV7 902 aaPredicted RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 MGLLQ99685 303 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 SHARPINQ9H0F6 387 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ERVMER34-1Q9H9K5 563 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 BRD7Q9NPI1 651 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 EIF2B3Q9NR50 452 aaKnown RBP4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 LATS2Q9NRM7 1088 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 PSORS1C1Q9UIG5 152 aa4.4□□□□□ -1.71
DEPDC1-202ENST00000456315 ARFGEF3Q5TH69 2177 aa4.39□□□□□ -1.71
DEPDC1-202ENST00000456315 ISPDA4D126 451 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms