RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 IGLV3-12A0A075B6K2 115 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 TTLL8A6PVC2 850 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 PCDH17O14917 1159 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 FBLP22087 321 aaKnown RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 CDKN2DP55273 166 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 AP1S2P56377 157 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 TBPL1P62380 186 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 TIAL1Q01085 375 aaKnown RBP eCLIP17.03■□□□□ 0.32
MSH6-207ENST00000456246 CBLBQ13191 982 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 DSG2Q14126 1118 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 RBBP7Q16576 425 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 NDUFA9Q16795 377 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 PNPLA2Q96AD5 504 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 MIEF2Q96C03 454 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 THAP11Q96EK4 314 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 CRB3Q9BUF7 120 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 TRIM54Q9BYV2 358 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 FAM129AQ9BZQ8 928 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 PLAC1Q9HBJ0 212 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 TMEM184CQ9NVA4 438 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 C14orf105Q9NVL8 296 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 ZFATQ9P243 1243 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 PDE10AQ9Y233 779 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 RUVBL1Q9Y265 456 aaKnown RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 VWA7Q9Y334 891 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 HS3ST3B1Q9Y662 390 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 MAU2Q9Y6X3 613 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 PCSK5Q92824 1860 aa17.03■□□□□ 0.32
MSH6-207ENST00000456246 MDC1Q14676 2089 aaKnown RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 SETXQ7Z333 2677 aaKnown RBP17.03■□□□□ 0.32
MSH6-207ENST00000456246 E7ESA3 106 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 SORBS2O94875 1100 aaKnown RBP17.02■□□□□ 0.32
MSH6-207ENST00000456246 RPS15AP62244 130 aaKnown RBP17.02■□□□□ 0.32
MSH6-207ENST00000456246 MGAT5Q09328 741 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 FAM53BQ14153 422 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 TUBB8Q3ZCM7 444 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 NADK2Q4G0N4 442 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 HECTD2Q5U5R9 776 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 IRAK1BP1Q5VVH5 260 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 AGTRAPQ6RW13 159 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 MAATS1Q7Z4T9 603 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 METTL27Q8N6F8 245 aaPredicted RBP17.02■□□□□ 0.32
MSH6-207ENST00000456246 GPATCH11Q8N954 259 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 STT3BQ8TCJ2 826 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 ATL1Q8WXF7 558 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 KRT12Q99456 494 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 TRIM31Q9BZY9 425 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 DRC3Q9H069 523 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 SOX17Q9H6I2 414 aaPredicted RBP17.02■□□□□ 0.32
MSH6-207ENST00000456246 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 FBXL4Q9UKA2 621 aa17.02■□□□□ 0.32
MSH6-207ENST00000456246 KCNE1BA0A087WTH5 132 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 FAM187AA6NFU0 413 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 H7BY64 318 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 SOCS6O14544 535 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 HAT1O14929 419 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 MED26O95402 600 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 ANXA5P08758 320 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 ENO2P09104 434 aaPredicted RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 ZGLP1P0C6A0 271 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 FDXRP22570 491 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 MLLT10P55197 1068 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 PDIA2Q13087 525 aaKnown RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 CALCOCO2Q13137 446 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 IGFBP7Q16270 282 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 JMJD6Q6NYC1 403 aaPredicted RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 TRMT10BQ6PF06 316 aaKnown RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 IGFL3Q6UXB1 125 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 SLC26A11Q86WA9 606 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 C17orf64Q86WR6 236 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 FBXO36Q8NEA4 188 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 CPT1CQ8TCG5 803 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 PDLIM5Q96HC4 596 aaKnown RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 PWWP2AQ96N64 755 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 PRAP1Q96NZ9 151 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 WDR83Q9BRX9 315 aaKnown RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 HAUS8Q9BT25 410 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 MKKSQ9NPJ1 570 aaPredicted RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 SLAMF7Q9NQ25 335 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 CUEDC1Q9NWM3 386 aaPredicted RBP17.01■□□□□ 0.31
MSH6-207ENST00000456246 ADAMTS6Q9UKP5 1117 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 PLAAQ9Y263 795 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 FLNCQ14315 2725 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 LRRK2Q5S007 2527 aa17.01■□□□□ 0.31
MSH6-207ENST00000456246 VPS4BO75351 444 aa17■□□□□ 0.31
MSH6-207ENST00000456246 TSPAN12O95859 305 aa17■□□□□ 0.31
MSH6-207ENST00000456246 ITGA3P26006 1051 aa17■□□□□ 0.31
MSH6-207ENST00000456246 GRK3P35626 688 aa17■□□□□ 0.31
MSH6-207ENST00000456246 FOXL2P58012 376 aa17■□□□□ 0.31
MSH6-207ENST00000456246 KLC1Q07866 573 aa17■□□□□ 0.31
MSH6-207ENST00000456246 HKDC1Q2TB90 917 aa17■□□□□ 0.31
MSH6-207ENST00000456246 COLEC12Q5KU26 742 aa17■□□□□ 0.31
MSH6-207ENST00000456246 HP1BP3Q5SSJ5 553 aaPredicted RBP17■□□□□ 0.31
MSH6-207ENST00000456246 SLC6A19Q695T7 634 aa17■□□□□ 0.31
MSH6-207ENST00000456246 CAPN13Q6MZZ7 669 aaPredicted RBP17■□□□□ 0.31
MSH6-207ENST00000456246 KIRREL2Q6UWL6 708 aa17■□□□□ 0.31
MSH6-207ENST00000456246 LCTLQ6UWM7 567 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms