RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 G6PDP11413 515 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 FCGR1AP12314 374 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ITPKAP23677 461 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 CD27P26842 260 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 DPP6P42658 865 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ZFP36L2P47974 494 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 CPA2P48052 419 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 HTR6P50406 440 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 DIO3P55073 304 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 SRP54P61011 504 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 RPL38P63173 70 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 TGM3Q08188 693 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ILF3Q12906 894 aaKnown RBP eCLIP6.59□□□□□ -1.352e-7■■■■□ 19.4
ECHDC1-210ENST00000454859 NFYCQ13952 458 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 KPNB1Q14974 876 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 RPE65Q16518 533 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 MAPKAPK3Q16644 382 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 C18orf21Q32NC0 220 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 RFTN2Q52LD8 501 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 LCN8Q6JVE9 175 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 MBOAT1Q6ZNC8 495 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 GCNT7Q6ZNI0 430 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 TRIM74Q86UV6 250 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 METTL4Q8N3J2 472 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 SLC13A3Q8WWT9 602 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 NEIL2Q969S2 332 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ESAMQ96AP7 390 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 BMFQ96LC9 184 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 PPP1R36Q96LQ0 422 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 C12orf66Q96MD2 445 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 CDK15Q96Q40 435 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 FERD3LQ96RJ6 166 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ROGDIQ9GZN7 287 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ATG10Q9H0Y0 220 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 RAD21L1Q9H4I0 556 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 EBF2Q9HAK2 575 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 MYNNQ9NPC7 610 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 DMRT3Q9NQL9 472 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ACSS2Q9NR19 701 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 MAP10Q9P2G4 905 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 ATP6V1HQ9UI12 483 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 BTNL2Q9UIR0 455 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 L3MBTL1Q9Y468 752 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 OR1A2Q9Y585 309 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 PCDHA9Q9Y5H5 950 aa6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-210ENST00000454859 A6NCN8 305 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 E7EQ34 232 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 ACOT8O14734 319 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 VILLO15195 856 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PGRP06401 933 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 GPIP06744 558 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 ABCB1P08183 1280 aaPredicted RBP6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 IFI6P09912 130 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 ACP5P13686 325 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 F3P13726 295 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 CAPN3P20807 821 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 CMPK1P30085 196 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 S100A3P33764 101 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 UFM1P61960 85 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PPP2CBP62714 309 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PPP2CAP67775 309 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 FLOT2Q14254 428 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 KRT33BQ14525 404 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 SKIV2LQ15477 1246 aaKnown RBP6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 CCDC6Q16204 474 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 NIPAL1Q6NVV3 410 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 DOK6Q6PKX4 331 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 CARFQ8N187 725 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PGBD3Q8N328 593 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 LMNTD1Q8N9Z9 388 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PPFIBP2Q8ND30 876 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 C7orf57Q8NEG2 295 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 TRPV3Q8NET8 790 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 COQ8BQ96D53 544 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 BHLHE41Q9C0J9 482 aaPredicted RBP6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 S100A14Q9HCY8 104 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 CNOT11Q9UKZ1 510 aaKnown RBP6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 GPSM3Q9Y4H4 160 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 POLR3HQ9Y535 204 aaPredicted RBP6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 PCDHB3Q9Y5E6 796 aa6.59□□□□□ -1.36
ECHDC1-210ENST00000454859 SPTY2D1-AS1A0A0U1RR47 76 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 ANKDD1BA6NHY2 528 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 METTL12A8MUP2 240 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 FFAR3O14843 346 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 CASQ2O14958 399 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC31A1O15431 190 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 GPR42O15529 346 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 MAP3K13O43283 966 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 TNFSF14O43557 240 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 CAPNS1P04632 268 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 IGHV4-34P06331 123 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 SLC6A2P23975 617 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 TIA1P31483 386 aaKnown RBP eCLIP6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 ACSL1P33121 698 aa6.58□□□□□ -1.36
ECHDC1-210ENST00000454859 VHLP40337 213 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms