RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 RNF149Q8NC42 400 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SRFBP1Q8NEF9 429 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TRPV1Q8NER1 839 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 OR9I1Q8NGQ6 314 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 UTP15Q8TED0 518 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 UBASH3BQ8TF42 649 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 UBTD2Q8WUN7 234 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ELMO1Q92556 727 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 GTF2H4Q92759 462 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 KCNJ9Q92806 393 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SNAPC3Q92966 411 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SLC25A46Q96AG3 418 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TMEM143Q96AN5 459 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 CCDC74AQ96AQ1 378 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 C18orf25Q96B23 403 aaPredicted RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TESCQ96BS2 214 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 DCPSQ96C86 337 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 CLIP3Q96DZ5 547 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 OTUB1Q96FW1 271 aaPredicted RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PDLIM5Q96HC4 596 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 MAP6Q96JE9 813 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ARL5BQ96KC2 179 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 MSLNLQ96KJ4 702 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 KCTD7Q96MP8 289 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SERPINB11Q96P15 392 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 FCRL3Q96P31 734 aaPredicted RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TEFMQ96QE5 360 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 DCLRE1CQ96SD1 692 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 IL12RB2Q99665 862 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TTYH2Q9BSA4 534 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ZNF416Q9BWM5 594 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 CDADC1Q9BWV3 514 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 BTBD2Q9BX70 525 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 DPY30Q9C005 99 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ROGDIQ9GZN7 287 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SRRQ9GZT4 340 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SLC25A51Q9H1U9 297 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SLC6A17Q9H1V8 727 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 MED28Q9H204 178 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 CDT1Q9H211 546 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ALG9Q9H6U8 611 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 LDAHQ9H6V9 325 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 IFT22Q9H7X7 185 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 IL1RL2Q9HB29 575 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 NTN4Q9HB63 628 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 RC3H2Q9HBD1 1191 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 GLOD4Q9HC38 313 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SLC52A3Q9NQ40 469 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ACSS2Q9NR19 701 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PDGFCQ9NRA1 345 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 RASSF1Q9NS23 344 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 FAM120CQ9NX05 1096 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 NDUFB11Q9NX14 153 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 FBXL12Q9NXK8 326 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 DPP3Q9NY33 737 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 IL37Q9NZH6 218 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TRPM5Q9NZQ8 1165 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SH3BP4Q9P0V3 963 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 KLQ9UEF7 1012 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 POLLQ9UGP5 575 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TRPS1Q9UHF7 1281 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SIX4Q9UIU6 781 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ELF5Q9UKW6 265 aaPredicted RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 MKL2Q9ULH7 1088 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 HCN4Q9Y3Q4 1203 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 RPL36Q9Y3U8 105 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SAMHD1Q9Y3Z3 626 aaKnown RBP3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 HSPB11Q9Y547 144 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ASB1Q9Y576 335 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PCDHB14Q9Y5E9 798 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PCDHB1Q9Y5F3 818 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PTCH2Q9Y6C5 1203 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 PMF1-BGLAPU3KQ54 211 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 UBR3Q6ZT12 1888 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 ZNF541Q9H0D2 1346 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 KIAA1217Q5T5P2 1943 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 TRIP11Q15643 1979 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 SCN9AQ15858 1988 aa3.36□□□□□ -1.87
AC006539.3-201ENST00000454258 COL11A1P12107 1806 aaPredicted RBP3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 ZFC3H1O60293 1989 aaKnown RBP3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 GLYATL1P3A0A0U1RQE8 302 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 SERTM1A2A2V5 107 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 PIPSLA2A3N6 862 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 GSAPA4D1B5 854 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 FABP12A6NFH5 140 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 ANKRD61A6NGH8 418 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 NUDT19A8MXV4 375 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 B4DXG7 233 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 H3BQ06 376 aaPredicted RBP3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 TMX2-CTNND1H3BSU7 103 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 M0QYT0 321 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 KCNK1O00180 336 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 CTDSP2O14595 271 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 TOR1AO14656 332 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 ABCD4O14678 606 aa3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 SMAD7O15105 426 aaKnown RBP3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 CASC3O15234 703 aaKnown RBP3.35□□□□□ -1.87
AC006539.3-201ENST00000454258 LYRM1O43325 122 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms