RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SMAD5Q99717 465 aaKnown RBP10.19□□□□□ -0.78
DDX39A-203ENST00000454233 CRB3Q9BUF7 120 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 YIPF2Q9BWQ6 316 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 TRIM54Q9BYV2 358 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 SOX17Q9H6I2 414 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-203ENST00000454233 SEMA3GQ9NS98 782 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 TMEM184CQ9NVA4 438 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 ZFATQ9P243 1243 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 STOX2Q9P2F5 926 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-203ENST00000454233 CTSFQ9UBX1 484 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 ZNF282Q9UDV7 671 aaPredicted RBP10.19□□□□□ -0.78
DDX39A-203ENST00000454233 FBXL4Q9UKA2 621 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 ADAMTS6Q9UKP5 1117 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 PDE10AQ9Y233 779 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 VWA7Q9Y334 891 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 TEX264Q9Y6I9 313 aa10.19□□□□□ -0.78
DDX39A-203ENST00000454233 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 VSTM2BA6NLU5 285 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 H7BY64 318 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 HAT1O14929 419 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MED26O95402 600 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 ITGA3P26006 1051 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 TBPL1P62380 186 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 TIAL1Q01085 375 aaKnown RBP eCLIP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MGAT5Q09328 741 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 CALCOCO2Q13137 446 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 NDUFA9Q16795 377 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 TUBB8Q3ZCM7 444 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 NADK2Q4G0N4 442 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 HECTD2Q5U5R9 776 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 TRMT10BQ6PF06 316 aaKnown RBP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 AGTRAPQ6RW13 159 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 SHISA6Q6ZSJ9 500 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MAATS1Q7Z4T9 603 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 C17orf64Q86WR6 236 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 LRRC56Q8IYG6 542 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 DTWD1Q8N5C7 304 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 FBXO36Q8NEA4 188 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 STT3BQ8TCJ2 826 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 TM9SF4Q92544 642 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MIB2Q96AX9 1013 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 ALKBH8Q96BT7 664 aaKnown RBP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 PRAP1Q96NZ9 151 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MFRPQ9BY79 579 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 PLAC1Q9HBJ0 212 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 SLAMF7Q9NQ25 335 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 CUEDC1Q9NWM3 386 aaPredicted RBP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 NSMCE4AQ9NXX6 385 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 SLC17A6Q9P2U8 582 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 PLAAQ9Y263 795 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 RUVBL1Q9Y265 456 aaKnown RBP10.18□□□□□ -0.78
DDX39A-203ENST00000454233 SNX24Q9Y343 169 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 HS3ST3B1Q9Y662 390 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 HEATR5BQ9P2D3 2071 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 MYO18BQ8IUG5 2567 aa10.18□□□□□ -0.78
DDX39A-203ENST00000454233 NBASA2RRP1 2371 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 SOCS6O14544 535 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 MAP2K7O14733 419 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 VPS4BO75351 444 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 ZGLP1P0C6A0 271 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 FDXRP22570 491 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 VARSP26640 1264 aaKnown RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 CASQ1P31415 396 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 GRK3P35626 688 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 RPL21P46778 160 aaKnown RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 AP1S2P56377 157 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 SOX8P57073 446 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 RPS15AP62244 130 aaKnown RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 KLC1Q07866 573 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 NAE1Q13564 534 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 DSG2Q14126 1118 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 HKDC1Q2TB90 917 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 CAPN13Q6MZZ7 669 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 JMJD6Q6NYC1 403 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 MBOAT1Q6ZNC8 495 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 PLD3Q8IV08 490 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 TMEM151BQ8IW70 566 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 PRSS58Q8IYP2 241 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 ZBED8Q8IZ13 594 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 ATL1Q8WXF7 558 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 PNPLA2Q96AD5 504 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 MMABQ96EY8 250 aaPredicted RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 WDR83Q9BRX9 315 aaKnown RBP10.17□□□□□ -0.78
DDX39A-203ENST00000454233 HAUS8Q9BT25 410 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 DRC3Q9H069 523 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 ATG10Q9H0Y0 220 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 C14orf105Q9NVL8 296 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 ARL15Q9NXU5 204 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 TRPC4Q9UBN4 977 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 C3orf18Q9UK00 162 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 VPS4AQ9UN37 437 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 TENM4Q6N022 2769 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 PCSK5Q92824 1860 aa10.17□□□□□ -0.78
DDX39A-203ENST00000454233 IGLV3-12A0A075B6K2 115 aa10.16□□□□□ -0.78
DDX39A-203ENST00000454233 A0A0A6YYC8 382 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-203ENST00000454233 E7ESA3 106 aa10.16□□□□□ -0.78
DDX39A-203ENST00000454233 I3L1I5 382 aaPredicted RBP10.16□□□□□ -0.78
DDX39A-203ENST00000454233 MASP2O00187 686 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms