RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NOL3O60936 208 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 MATN4O95460 622 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TNFP01375 233 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 RPN2P04844 631 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 INHBBP09529 407 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 HSD17B1P14061 328 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 NCF1P14598 390 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 IDSP22304 550 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 VARSP26640 1264 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 PDHA2P29803 388 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 NAA20P61599 178 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ATP6AP1Q15904 470 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 SLC36A3Q495N2 470 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 COQ5Q5HYK3 327 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 CDKL4Q5MAI5 379 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 METRNLQ641Q3 311 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 LCN8Q6JVE9 175 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 RD3Q7Z3Z2 195 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 SPRED1Q7Z699 444 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 PDZD3Q86UT5 571 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 HID1Q8IV36 788 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 RNF148Q8N7C7 305 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 CCNYL1Q8N7R7 359 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 AGR3Q8TD06 166 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 CHPT1Q8WUD6 406 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 THAP11Q96EK4 314 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 PDXPQ96GD0 296 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ADI1Q9BV57 179 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TM7SF3Q9NS93 570 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ABCD2Q9UBJ2 740 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 GULP1Q9UBP9 304 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 BDP1A6H8Y1 2624 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ZFC3H1O60293 1989 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 SPTY2D1-AS1A0A0U1RR47 76 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 A0A1B0GTW7 788 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 PRORSD1PA6NEY8 169 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 GFYI3L273 518 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 FBP2O00757 339 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 STX16O14662 325 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 KLK8O60259 260 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 PSIP1O75475 530 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 RASGRP1O95267 797 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 FUCA1P04066 466 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 GPIP06744 558 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ANXA5P08758 320 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 CD1EP15812 388 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 JUNBP17275 347 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 IMPDH1P20839 514 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 IL10P22301 178 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 MSX2P35548 267 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 RPIAP49247 311 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 BLKP51451 505 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 AP1S2P56377 157 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 HERVK_113P63132 956 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 PPP1R3AQ16821 1122 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ALG11Q2TAA5 492 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TPRG1LQ5T0D9 272 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TMTC4Q5T4D3 741 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 SULT1C3Q6IMI6 304 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TTC23LQ6PF05 361 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 UNC5DQ6UXZ4 953 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 FAM83HQ6ZRV2 1179 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 BMP8AQ7Z5Y6 402 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TCAIMQ8N3R3 496 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TSACCQ96A04 125 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 L3HYPDHQ96EM0 354 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 NPLQ9BXD5 320 aaPredicted RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 ERVK-6Q9BXR3 956 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 RPF2Q9H7B2 306 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 GPR27Q9NS67 375 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 ARL15Q9NXU5 204 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 TNPO3Q9Y5L0 923 aaKnown RBP15.35■□□□□ 0.05
SNX17-204ENST00000453453 DGKBQ9Y6T7 804 aa15.35■□□□□ 0.05
SNX17-204ENST00000453453 GUCA1CO95843 209 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 MTHFD2P13995 350 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 RELAQ04206 551 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 MERTKQ12866 999 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 TUBA3CQ13748 450 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 PHKG1Q16816 387 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 AGKQ53H12 422 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 NIPAL1Q6NVV3 410 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 ABRAXAS1Q6UWZ7 409 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 PARGQ86W56 976 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 SLC22A18ASQ8N1D0 253 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 TBC1D15Q8TC07 691 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 TRUB1Q8WWH5 349 aaKnown RBP15.34■□□□□ 0.05
SNX17-204ENST00000453453 DNASE2BQ8WZ79 361 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 CIB1Q99828 191 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 OR52A5Q9H2C5 316 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 SEMA6AQ9H2E6 1030 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 CXorf21Q9HAI6 301 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 TM9SF3Q9HD45 589 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 AGPAT4Q9NRZ5 378 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 TRNAU1APQ9NX07 287 aaKnown RBP15.34■□□□□ 0.05
SNX17-204ENST00000453453 GIN1Q9NXP7 522 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 PDE10AQ9Y233 779 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 KCNK6Q9Y257 313 aa15.34■□□□□ 0.05
SNX17-204ENST00000453453 NDUFAF1Q9Y375 327 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms