RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CATSPEREQ5SY80 951 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 PAOXQ6QHF9 649 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 PRSS57Q6UWY2 283 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 CPEB2Q7Z5Q1 589 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 WDR53Q7Z5U6 358 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 TMEM139Q8IV31 216 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 LRRC75A-AS1Q8N1F1 130 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC5A8Q8N695 610 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ZUFSPQ96AP4 578 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 COPS8Q99627 209 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 MRPL47Q9HD33 250 aaKnown RBP11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 UBP1Q9NZI7 540 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 MYO1AQ9UBC5 1043 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 CRLS1Q9UJA2 301 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 SCINQ9Y6U3 715 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
AC004540.1-204ENST00000449537 LOC105369274A0A096LPK9 316 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 LOC102723532A0A0G2JNH3 316 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 TRIM64BA6NI03 449 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 TARM1B6A8C7 271 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 KLRC4-KLRK1H3BQV0 150 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 SMPD2O60906 423 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 CTSVO60911 334 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 EPOP01588 193 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 EPXP11678 715 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 ACADLP28330 430 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC25A11Q02978 314 aaKnown RBP11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 DPYSL3Q14195 570 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 FRMPD2BQ6IN97 320 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 OR4N4Q8N0Y3 316 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 C2orf73Q8N5S3 287 aaPredicted RBP11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 KCTD6Q8NC69 237 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 OR5K2Q8NHB8 316 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 M1APQ8TC57 530 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 TMEM125Q96AQ2 219 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 ULK4Q96C45 1275 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 LRRC46Q96FV0 321 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 CABS1Q96KC9 395 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 ISCUQ9H1K1 167 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 GLOD4Q9HC38 313 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 NENFQ9UMX5 172 aa11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
AC004540.1-204ENST00000449537 A0A087X0T9 212 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 NPIPA2E9PIF3 369 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 NPIPA3F8WFD2 350 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 S1PR4O95977 384 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 ANXA5P08758 320 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 FAM228BP0C875 321 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 SKILP12757 684 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 SLC26A3P40879 764 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 RFC3P40938 356 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 CYB561P49447 251 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 WNT3AP56704 352 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 EXT1Q16394 746 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF468Q5VIY5 522 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF585AQ6P3V2 769 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 OR5M9Q8NGP3 310 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 C16orf52Q8NHV5 167 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 CTNNBL1Q8WYA6 563 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 MVB12AQ96EY5 273 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 MMABQ96EY8 250 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 CYTH2Q99418 400 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 TSGA10Q9BZW7 698 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 DEFB127Q9H1M4 99 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 CDCP1Q9H5V8 836 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 PNPLA3Q9NST1 481 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 C19orf25Q9UFG5 118 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 FAM153AQ9UHL3 310 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 KLF13Q9Y2Y9 288 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 ZNF407Q9C0G0 2248 aa11.84□□□□□ -0.51
AC004540.1-204ENST00000449537 A0A0A6YYK5 440 aaPredicted RBP11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 SOWAHDA6NJG2 315 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 FIGNL2A6NMB9 653 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 AGAP14A8MT82 685 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 GSTM1P09488 218 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 H2AFZP0C0S5 128 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 CCDC175P0C221 793 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 TMEM253P0C7T8 217 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 ERVK-10P10266 1014 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 CHRNA4P43681 627 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 EMP3P54852 163 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 TAS2R50P59544 299 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 CCZ1BP86790 482 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 GSTM4Q03013 218 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 MESDQ14696 234 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 HADHQ16836 314 aaKnown RBP11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 H2AFVQ71UI9 128 aa11.83□□□□□ -0.52
AC004540.1-204ENST00000449537 YTHDF3Q7Z739 585 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms