RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 NCSTNQ92542 709 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CD180Q99467 661 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 DPH7Q9BTV6 452 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 SPNS1Q9H2V7 528 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 MN1Q10571 1320 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 H0YIV9 168 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 H7BY64 318 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CAPN5O15484 640 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 C9P02748 559 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 GP1BAP07359 652 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 GFERP55789 205 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 REEP5Q00765 189 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 SLBPQ14493 270 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 UGT3A2Q3SY77 523 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PAGE2BQ5JRK9 111 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 STPG1Q5TH74 334 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 FAM219BQ5XKK7 198 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 CGB2Q6NT52 195 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 IRGCQ6NXR0 463 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PAQR7Q86WK9 346 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 ZDHHC12Q96GR4 267 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PRR11Q96HE9 360 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PRAP1Q96NZ9 151 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PLCD4Q9BRC7 762 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PITHD1Q9GZP4 211 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 EPN3Q9H201 632 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 SEMA6CQ9H3T2 930 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 MARCOQ9UEW3 520 aaPredicted RBP13.51□□□□□ -0.25
SHMT2-203ENST00000449049 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
SHMT2-203ENST00000449049 PCM1Q15154 2024 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 A0A1W2PQM1 296 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 OR2A25A4D2G3 310 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 HGSO14964 777 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-203ENST00000449049 CRCPO75575 148 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 MAGP20916 626 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 DRD4P21917 467 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 LIMK1P53667 647 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 CPSF6Q16630 551 aaKnown RBP eCLIP13.5□□□□□ -0.25
SHMT2-203ENST00000449049 CLPPQ16740 277 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-203ENST00000449049 AMZ1Q400G9 498 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 RNF165Q6ZSG1 346 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
SHMT2-203ENST00000449049 PLXDC1Q8IUK5 500 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 LAS2Q8IYD9 372 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 CARFQ8N187 725 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 AFAP1L2Q8N4X5 818 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 METTL6Q8TCB7 284 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 FAR2Q96K12 515 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 PPM1MQ96MI6 270 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 AIF1LQ9BQI0 150 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 SARGQ9BW04 601 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 NT5DC2Q9H857 520 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 C1GALT1Q9NS00 363 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 TIMM22Q9Y584 194 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 DNAJC15Q9Y5T4 150 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 GPR179Q6PRD1 2367 aa13.5□□□□□ -0.25
SHMT2-203ENST00000449049 TLCD2A6NGC4 264 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 SLCO1B7G3V0H7 640 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 CASC3O15234 703 aaKnown RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 RPLP0P05388 317 aaKnown RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 KITP10721 976 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 CXCR2P25025 360 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 HMOX2P30519 316 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ACADVLP49748 655 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 CCL7P80098 99 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ZRSR2Q15696 482 aaKnown RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 FCRL6Q6DN72 434 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 MED27Q6P2C8 311 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 KRT78Q8N1N4 520 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 TGM7Q96PF1 710 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 CDC6Q99741 560 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 VTI1BQ9UEU0 232 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ZNF490Q9ULM2 529 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 KLHL20Q9Y2M5 609 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 FIS1Q9Y3D6 152 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 TSC22D4Q9Y3Q8 395 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 TRBC2A0A5B9 178 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ZNF195O14628 629 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 FFAR3O14843 346 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 GPR42O15529 346 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 NRP2O60462 931 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 PVRP15151 417 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ALOX15P16050 662 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 CDH3P22223 829 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 PPM1FP49593 454 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 RELAQ04206 551 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 HIST2H2ACQ16777 129 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 TCHHL1Q5QJ38 904 aaPredicted RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 FIGLAQ6QHK4 219 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 FAM92BQ6ZTR7 304 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ADCK2Q7Z695 626 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 WDR75Q8IWA0 830 aaKnown RBP13.49□□□□□ -0.25
SHMT2-203ENST00000449049 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
SHMT2-203ENST00000449049 WDR20Q8TBZ3 569 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms