RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 RAB20Q9NX57 234 aa5.87□□□□□ -1.47
BRAFP1-201ENST00000445336 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.87□□□□□ -1.47
BRAFP1-201ENST00000445336 ACTR10Q9NZ32 417 aa5.87□□□□□ -1.47
BRAFP1-201ENST00000445336 FBXO9Q9UK97 447 aaPredicted RBP5.87□□□□□ -1.47
BRAFP1-201ENST00000445336 A0A0U1RQJ8 604 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 SYNDIG1LA6NDD5 238 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 OR52A4PA6NMU1 304 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 G3V4G9 280 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PDXKO00764 312 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PMM2O15305 246 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 GSTM1P09488 218 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 TACSTD2P09758 323 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 EZRP15311 586 aaKnown RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 EPHA1P21709 976 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 FBLP22087 321 aaKnown RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 CHMP24386 653 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 CASP4P49662 377 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 KHKP50053 298 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 GSTM4Q03013 218 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 XRCC4Q13426 336 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 FASTKQ14296 549 aaKnown RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 ZSWIM7Q19AV6 140 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 FBXO38Q6PIJ6 1188 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 AMZ2Q86W34 360 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 ZNF227Q86WZ6 799 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 GPSM1Q86YR5 675 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PAF1Q8N7H5 531 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 OR52N2Q8NGI0 321 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 SMAP2Q8WU79 429 aaPredicted RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 KISS1RQ969F8 398 aaPredicted RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 TP53INP1Q96A56 240 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PKNOX2Q96KN3 472 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 C11orf70Q9BRQ4 267 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 NUP85Q9BW27 656 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 ZNF703Q9H7S9 590 aaPredicted RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PIGVQ9NUD9 493 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 RPUSD1Q9UJJ7 312 aaKnown RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 PACSIN3Q9UKS6 424 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 GRIP1Q9Y3R0 1128 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 SEC16AO15027 2179 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 MALRD1Q5VYJ5 2156 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 RCBTB2O95199 551 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 F10P00742 488 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 KNG1P01042 644 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 IL10P22301 178 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 AIF1P55008 147 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 STK3Q13188 491 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 ARMC12Q5T9G4 340 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 FAM205BPQ63HN1 556 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 METRNLQ641Q3 311 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 TTLL10Q6ZVT0 673 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 TRIM74Q86UV6 250 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 RPS19BP1Q86WX3 136 aaKnown RBP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 BBS5Q8N3I7 341 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 OR4F5Q8NH21 305 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 AKAP1Q92667 903 aaKnown RBP eCLIP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 FANCFQ9NPI8 374 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 HAUS2Q9NVX0 235 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 ADAM22Q9P0K1 906 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 CNTN6Q9UQ52 1028 aa5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.86□□□□□ -1.47
BRAFP1-201ENST00000445336 NPIPB15A6NHN6 443 aaPredicted RBP5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 J3QLI3 93 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 FOXN3O00409 490 aaPredicted RBP5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 C8orf89P0DMQ9 161 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 PRTN3P24158 256 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 RPL13P26373 211 aaKnown RBP5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 TPP2P29144 1249 aaPredicted RBP5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 PITX1P78337 314 aaPredicted RBP5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 NHSL2Q5HYW2 709 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 AGAP6Q5VW22 663 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 RRAGBQ5VZM2 374 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 SYT10Q6XYQ8 523 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 CILP2Q8IUL8 1156 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 FAM173AQ9BQD7 235 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 PLAC1Q9HBJ0 212 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 SLC23A2Q9UGH3 650 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 NEU3Q9UQ49 428 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 TRGV5A0A0B4J1U4 118 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 GOLGA6L10A0A0M3HER8 536 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 ARHGAP42A6NI28 874 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 GOLGA6L10A6NI86 522 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 GOLGA6L19H0YKK7 550 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 SHMT2P34897 504 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 SPINT3P49223 89 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 NUMBP49757 651 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 CD69Q07108 199 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 NME3Q13232 169 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 PTK6Q13882 451 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 KIR2DS3Q14952 304 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 SLC10A1Q14973 349 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 BBS9Q3SYG4 887 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 ZDHHC20Q5W0Z9 365 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 OLFML2AQ68BL7 652 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 OR5M9Q8NGP3 310 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 LCN9Q8WX39 176 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 GLYATL1Q969I3 302 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 KREMEN1Q96MU8 473 aa5.85□□□□□ -1.47
BRAFP1-201ENST00000445336 ZSWIM1Q9BR11 485 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms