RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ZNF425Q6IV72 752 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 CAND1Q86VP6 1230 aaKnown RBP14.67□□□□□ -0.06
SEC13-213ENST00000445064 PLD3Q8IV08 490 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 AMER3Q8N944 861 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 PRELID2Q8N945 189 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 ZNF480Q8WV37 535 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 MVB12AQ96EY5 273 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 MAGEB10Q96LZ2 347 aaPredicted RBP14.67□□□□□ -0.06
SEC13-213ENST00000445064 PCYOX1Q9UHG3 505 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 CACNA1DQ01668 2161 aa14.67□□□□□ -0.06
SEC13-213ENST00000445064 DYTNA2CJ06 578 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 CTAGE9A4FU28 777 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 GOLGA6L6A8MZA4 724 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 PRPF4O43172 522 aaKnown RBP eCLIP14.66□□□□□ -0.06
SEC13-213ENST00000445064 PHF2O75151 1096 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 JRKO75564 520 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 WFS1O76024 890 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 STATHP02808 62 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 SERPINA7P05543 415 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ANXA5P08758 320 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 HSD17B2P37059 387 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 PER3P56645 1201 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 SNRPNP63162 240 aaKnown RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 MAT1AQ00266 395 aaKnown RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 DHX34Q14147 1143 aaKnown RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 GARNL3Q5VVW2 1013 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ANKRD22Q5VYY1 191 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ZNF549Q6P9A3 640 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 CYHR1Q6ZMK1 362 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ADCK2Q7Z695 626 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 DENND6AQ8IWF6 608 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ARHGEF39Q8N4T4 335 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 BCORP1Q8N888 145 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 GIMAP7Q8NHV1 300 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 HAS2Q92819 552 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 RERGQ96A58 199 aaPredicted RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 TAAR6Q96RI8 345 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 SLX1AQ9BQ83 275 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 MKKSQ9NPJ1 570 aaPredicted RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 FBXO6Q9NRD1 293 aaPredicted RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 HOMER3Q9NSC5 361 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 OLAHQ9NV23 265 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 INTS10Q9NVR2 710 aaKnown RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 UTP6Q9NYH9 597 aaKnown RBP14.66□□□□□ -0.06
SEC13-213ENST00000445064 SAMD15Q9P1V8 674 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 MKL2Q9ULH7 1088 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 MED16Q9Y2X0 877 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 CROCCQ5TZA2 2017 aa14.66□□□□□ -0.06
SEC13-213ENST00000445064 ZNF839A8K0R7 811 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 GOLGA8MH3BSY2 632 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 H7BY64 318 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 SMAPO00193 183 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 HAT1O14929 419 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 P2RX6O15547 441 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 ZG16O60844 167 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 CCNDBP1O95273 360 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 BMP10O95393 424 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 KRT14P02533 472 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 UQCRHP07919 91 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 ITGAMP11215 1152 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 EZRP15311 586 aaKnown RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 SOX11P35716 441 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 TNFSF10P50591 281 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 EFNA3P52797 238 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 SRSF11Q05519 484 aaKnown RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 THOC5Q13769 683 aaKnown RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 ZRSR2Q15696 482 aaKnown RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 TTLL9Q3SXZ7 439 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 THEMIS2Q5TEJ8 643 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 ZNF324BQ6AW86 544 aaPredicted RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 ZNF470Q6ECI4 717 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 NEK10Q6ZWH5 1172 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 FJX1Q86VR8 437 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 LRRC56Q8IYG6 542 aaPredicted RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 SHISA5Q8N114 240 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 ASB11Q8WXH4 323 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 ZNF669Q96BR6 464 aaPredicted RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 PRAP1Q96NZ9 151 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 TGIF2Q9GZN2 237 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 DRC3Q9H069 523 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.65□□□□□ -0.067e-9■■□□□ 12.4
SEC13-213ENST00000445064 C14orf105Q9NVL8 296 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 VPS9D1Q9Y2B5 631 aa14.65□□□□□ -0.06
SEC13-213ENST00000445064 MRPS2Q9Y399 296 aaKnown RBP14.65□□□□□ -0.06
SEC13-213ENST00000445064 UNC79Q9P2D8 2635 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.64□□□□□ -0.07
SEC13-213ENST00000445064 LOC102723996A0A087X1L8 192 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 TRAV17A0A0B4J275 112 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 FAM237BA0A1B0GVD1 139 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 A0A1W2PQ72 361 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 MAGEB16A2A368 324 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 SDR42E2A6NKP2 422 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 GFYI3L273 518 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 TXNDC9O14530 226 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 ZBTB14O43829 449 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 STSP08842 583 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 CCDC175P0C221 793 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 MPC1LP0DKB6 136 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 FDXRP22570 491 aa14.64□□□□□ -0.07
SEC13-213ENST00000445064 MAGEA6P43360 314 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms