RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 C17orf64Q86WR6 236 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 OR2L3Q8NG85 312 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 PPP1R14CQ8TAE6 165 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 FLVCR1-AS1Q8TAF5 88 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 SREK1Q8WXA9 508 aaKnown RBP16.56■□□□□ 0.24
LIME1-202ENST00000444951 ERVK-6Q9BXR3 956 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 PITPNM3Q9BZ71 974 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 SEMA6CQ9H3T2 930 aa16.56■□□□□ 0.24
LIME1-202ENST00000444951 MRPS30Q9NP92 439 aaKnown RBP16.56■□□□□ 0.24
LIME1-202ENST00000444951 CUEDC1Q9NWM3 386 aaPredicted RBP16.56■□□□□ 0.24
LIME1-202ENST00000444951 ZNF462Q96JM2 2506 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 A0A0J9YY10 115 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 SLC9B1P1A6NJY1 282 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 D6RAR5 112 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 TRIM13O60858 407 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 CHN1P15882 459 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 EPB42P16452 691 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 IMPDH1P20839 514 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 CDH13P55290 713 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 CDC16Q13042 620 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 GTF2H2Q13888 395 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 UNC50Q53HI1 259 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 ZNF678Q5SXM1 525 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 ARHGAP40Q5TG30 622 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 GTF2H2CQ6P1K8 395 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 LCTLQ6UWM7 567 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 ZNF574Q6ZN55 896 aaPredicted RBP16.55■□□□□ 0.24
LIME1-202ENST00000444951 GOLGA7Q7Z5G4 137 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 LSMEM2Q8N112 164 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 KCNE4Q8WWG9 221 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 ATP6V1E2Q96A05 226 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 HAUS8Q9BT25 410 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 PCBD2Q9H0N5 130 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 SEMA4BQ9NPR2 832 aaPredicted RBP16.55■□□□□ 0.24
LIME1-202ENST00000444951 EPHA6Q9UF33 1036 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 KCNE2Q9Y6J6 123 aa16.55■□□□□ 0.24
LIME1-202ENST00000444951 MN1Q10571 1320 aaPredicted RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 IGHV5-10-1A0A0J9YXX1 117 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 TEX51A0A1B0GUA7 166 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 TLCD2A6NGC4 264 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 E7EQ34 232 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 NTN3O00634 580 aaPredicted RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 E2F3O00716 465 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CLGNO14967 610 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 KLK10O43240 276 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 PRAMEF10O60809 474 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CCNDBP1O95273 360 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 RPS17P08708 135 aaKnown RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 ST6GAL1P15907 406 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 MAGP20916 626 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CCR10P46092 362 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 ARL4DP49703 201 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SLC18A1P54219 525 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 DNAJB13P59910 316 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 MEF2AQ02078 507 aaPredicted RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 PRDX1Q06830 199 aaKnown RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 ASPHQ12797 758 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SQSTM1Q13501 440 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CHI3L2Q15782 390 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SLC5A12Q1EHB4 618 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CATSPEREQ5SY80 951 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 FOXR1Q6PIV2 292 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 IGF2-ASQ6U949 168 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 B3GNT8Q7Z7M8 397 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 TMPRSS11BQ86T26 416 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 MYLK4Q86YV6 388 aaPredicted RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 KLHDC8AQ8IYD2 350 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 ZNF843Q8N446 348 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 RCBTB1Q8NDN9 531 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 OR4D9Q8NGE8 314 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 TRPC4APQ8TEL6 797 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SLC5A11Q8WWX8 675 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 NEIL2Q969S2 332 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 L3HYPDHQ96EM0 354 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SLC46A1Q96NT5 459 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 DPH7Q9BTV6 452 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 GATA5Q9BWX5 397 aaPredicted RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 RAB33BQ9H082 229 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 NOL11Q9H8H0 719 aaKnown RBP16.54■□□□□ 0.24
LIME1-202ENST00000444951 IPPKQ9H8X2 491 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SLC6A20Q9NP91 592 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 THSD1Q9NS62 852 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 SOHLH2Q9NX45 425 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 BSNQ9UPA5 3926 aa16.54■□□□□ 0.24
LIME1-202ENST00000444951 UNC13CQ8NB66 2214 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 IGHV5-51A0A0C4DH38 117 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 CDRT15L2A8MXV6 281 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 H7BY64 318 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 BIRC5O15392 142 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 NRP2O60462 931 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 KATNA1O75449 491 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 C9P02748 559 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 DHRS4L1P0CG22 281 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 BGNP21810 368 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 VARSP26640 1264 aaKnown RBP16.53■□□□□ 0.24
LIME1-202ENST00000444951 GRIA3P42263 894 aa16.53■□□□□ 0.24
LIME1-202ENST00000444951 XKR6Q5GH73 641 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms