RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 BMP2P12643 396 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 HOXB6P17509 224 aaKnown RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 CXCR2P25025 360 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 TACR1P25103 407 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 FASP25445 335 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 HPCAL1P37235 193 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 CTBSQ01459 385 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 FGL2Q14314 439 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 PGS1Q32NB8 556 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 GLYATQ6IB77 296 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 ANKFN1Q8N957 763 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 OR2T12Q8NG77 320 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 OR8J2Q8NGG1 315 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 CHTF18Q8WVB6 975 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 SIPA1Q96FS4 1042 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 MSANTD3Q96H12 275 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 RAB11FIP5Q9BXF6 653 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 TRIM8Q9BZR9 551 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 PAIP1Q9H074 479 aaKnown RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 PELI2Q9HAT8 420 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 GEMIN8Q9NWZ8 242 aaKnown RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 SLC17A4Q9Y2C5 497 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 TDRKHQ9Y2W6 561 aaKnown RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 NEUROG3Q9Y4Z2 214 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 PCYT1BQ9Y5K3 369 aaPredicted RBP15.13■□□□□ 0.01
SNX13-204ENST00000444712 MTCH2Q9Y6C9 303 aa15.13■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3DA0A087WVF3 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3IA0A087WXS9 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3EA0A087X179 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3KA0A087X1G2 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TCRBV5S2A0A599 114 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3FA6NER0 549 aaPredicted RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3LB9A6J9 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 GSTA4O15217 222 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 HOXC4P09017 264 aaPredicted RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3HP0C7X1 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 ACADMP11310 421 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 GGT1P19440 569 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 SERPINB1P30740 379 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TIA1P31483 386 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNX13-204ENST00000444712 RPL3P39023 403 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 POLE2P56282 527 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 YBX1P67809 324 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 FBXO43Q4G163 708 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 EOGTQ5NDL2 527 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 CATSPEREQ5SY80 951 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3GQ6DHY5 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 CAPRIN2Q6IMN6 1127 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3CQ6IPX1 549 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 GALNT18Q6P9A2 607 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 C17orf64Q86WR6 236 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 ADGRG5Q8IZF4 528 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TBC1D3Q8IZP1 549 aaPredicted RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 PAPD5Q8NDF8 572 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 DENND6BQ8NEG7 585 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 TRPV3Q8NET8 790 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 EBPLQ9BY08 206 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 SCOCQ9UIL1 159 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 ATG2BQ96BY7 2078 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 DOCK9Q9BZ29 2069 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 FAM220BPB1ANY3 271 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 RFXANKO14593 260 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 KDM1AO60341 852 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 ANXA6P08133 673 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 COX7A2P14406 83 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 GLULP15104 373 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 IGFALSP35858 605 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 OR4D2P58180 307 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 RPS13P62277 151 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 CHST15Q7LFX5 561 aaPredicted RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 C1orf52Q8N6N3 182 aaKnown RBP15.12■□□□□ 0.01
SNX13-204ENST00000444712 PACRGLQ8N7B6 248 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 VPS37AQ8NEZ2 397 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 OR52E4Q8NGH9 312 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 SMPDL3AQ92484 453 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 ZNF583Q96ND8 569 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 YY1AP1Q9H869 796 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 GORASP2Q9H8Y8 452 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 SERHLQ9NQF3 203 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 DMRT3Q9NQL9 472 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
SNX13-204ENST00000444712 PRR23AA6NEV1 266 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 DENRO43583 198 aaKnown RBP15.11■□□□□ 0.01
SNX13-204ENST00000444712 TIPRLO75663 272 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 ANXA4P09525 319 aaPredicted RBP15.11■□□□□ 0.01
SNX13-204ENST00000444712 MTHFD1P11586 935 aaKnown RBP15.11■□□□□ 0.01
SNX13-204ENST00000444712 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
SNX13-204ENST00000444712 COL9A1P20849 921 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 CLCNKAP51800 687 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 PLIN5Q00G26 463 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 SELPLGQ14242 412 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 DUOXA1Q1HG43 343 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 ANXA8L1Q5VT79 327 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 CAMKMTQ7Z624 323 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 RNF175Q8N4F7 328 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 KLK6Q92876 244 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 GATA6Q92908 595 aa15.11■□□□□ 0.01
SNX13-204ENST00000444712 CPPED1Q9BRF8 314 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms