RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 PFKFB4Q16877 469 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 PRAMEF9Q5VWM5 478 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 ADCK2Q7Z695 626 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 PROSER1Q86XN7 944 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 DTX1Q86Y01 620 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 TCAIMQ8N3R3 496 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 RIBC1Q8N443 379 aaPredicted RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 ZNF740Q8NDX6 193 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 ABHD11Q8NFV4 315 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 MYRIPQ8NFW9 859 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 OR4K1Q8NGD4 311 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 NAF1Q96HR8 494 aaKnown RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 ZNF285Q96NJ3 590 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 ULBP3Q9BZM4 244 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 CD244Q9BZW8 370 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 C12orf65Q9H3J6 166 aaKnown RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 STARD5Q9NSY2 213 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 TMEM184CQ9NVA4 438 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 TMEM184BQ9Y519 407 aaPredicted RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 ACACAQ13085 2346 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 CACNA1GO43497 2377 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 ANKRD11Q6UB99 2663 aaPredicted RBP15.35■□□□□ 0.05
USP39-205ENST00000442708 CHD6Q8TD26 2715 aa15.35■□□□□ 0.05
USP39-205ENST00000442708 USP24Q9UPU5 2620 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 FEZF1A0PJY2 475 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 TMEM8BA6NDV4 472 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 SYCE1LA8MT33 242 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 E7EQ34 232 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 H0YGG7 62 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 LCMT2O60294 686 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 CCNT2O60583 730 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 ERLIN1O75477 346 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 SCRG1O75711 98 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 STK16O75716 305 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 OR2B3O76000 313 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 GCGRP47871 477 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 PCBP4P57723 403 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 ARF3P61204 181 aaPredicted RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 SNRPNP63162 240 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 SLC18A2Q05940 514 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 ZC3H12BQ5HYM0 836 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 TRABD2AQ86V40 505 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 BPHLQ86WA6 291 aaPredicted RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 C4orf33Q8N1A6 199 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 OR8K5Q8NH50 307 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 HNRNPLLQ8WVV9 542 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 OR2A5Q96R48 311 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 ZFYVE21Q9BQ24 234 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 MRPL57Q9BQC6 102 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 MRPL46Q9H2W6 279 aaKnown RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 AKIRIN1Q9H9L7 192 aaPredicted RBP15.34■□□□□ 0.05
USP39-205ENST00000442708 FANCEQ9HB96 536 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 DNAJC11Q9NVH1 559 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 SERTAD3Q9UJW9 196 aa15.34■□□□□ 0.05
USP39-205ENST00000442708 ZNF749O43361 778 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 IPO13O94829 963 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 SIX3O95343 332 aaPredicted RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 MED26O95402 600 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 STATHP02808 62 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 GSTA1P08263 222 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 GFAPP14136 432 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 EZRP15311 586 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 CREB1P16220 341 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 KRT4P19013 534 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 HRH2P25021 359 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 VARSP26640 1264 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 EIF2S3P41091 472 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 BCL6P41182 706 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 ALDH18A1P54886 795 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 VSX2P58304 361 aaPredicted RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 CDC16Q13042 620 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 SRSF6Q13247 344 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 CLN3Q13286 438 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 NAA25Q14CX7 972 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 KRT71Q3SY84 523 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 CYB5D1Q6P9G0 228 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 NXPE4Q6UWF7 544 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 SLCO4C1Q6ZQN7 724 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 TMEM126BQ8IUX1 230 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 DTWD1Q8N5C7 304 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 ZNF655Q8N720 491 aaPredicted RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 GALNT6Q8NCL4 622 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 SLC5A11Q8WWX8 675 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 N4BP2L2Q92802 583 aaPredicted RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 PHF21BQ96EK2 531 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 SELENOSQ9BQE4 189 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 CNOT10Q9H9A5 744 aaKnown RBP15.33■□□□□ 0.04
USP39-205ENST00000442708 ENAMQ9NRM1 1142 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 DYRK1BQ9Y463 629 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 BAHCC1Q9P281 2608 aa15.33■□□□□ 0.04
USP39-205ENST00000442708 STMND1H3BQB6 276 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 P2RX6O15547 441 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 LIPCP11150 499 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 CD82P27701 267 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 CCR8P51685 355 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 RELAQ04206 551 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 GPS2Q13227 327 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 PDK4Q16654 411 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms