RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RNF215Q9Y6U7 377 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SOCS2O14508 198 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 LDB2O43679 373 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 S1PR4O95977 384 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATP6V1B2P21281 511 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SLC26A3P40879 764 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 FLOT2Q14254 428 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 RBBP5Q15291 538 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZRSR2Q15696 482 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATP13A5Q4VNC0 1218 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 C14orf28Q4W4Y0 310 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 SPRED1Q7Z699 444 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CILP2Q8IUL8 1156 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CLDN19Q8N6F1 224 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ICA1LQ8NDH6 482 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 MCOLN3Q8TDD5 553 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 VPS50Q96JG6 964 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 BMFQ96LC9 184 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 DPYSL5Q9BPU6 564 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 C1QTNF3Q9BXJ4 246 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 RMI1Q9H9A7 625 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 PDE7BQ9NP56 450 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 NLGN3Q9NZ94 848 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 CDYLQ9Y232 598 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 BTBD3Q9Y2F9 522 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 NBASA2RRP1 2371 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 THADAQ6YHU6 1953 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZNF318Q5VUA4 2279 aa7.16□□□□□ -1.26
CDC42BPA-208ENST00000442054 H3BMM5 538 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KLK8O60259 260 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PAPLNO95428 1278 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 POLR2CP19387 275 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 CYP2A7P20853 494 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 AGXTP21549 392 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 FDXRP22570 491 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 ATP5F1P24539 256 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 CXCR2P25025 360 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 STC1P52823 247 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PSME3P61289 254 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PLOD1Q02809 727 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 SEMA3AQ14563 771 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 GUSBP11Q6P575 273 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 C19orf48Q6RUI8 117 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 RFLNAQ6ZTI6 216 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 LDB1Q86U70 411 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 GPR150Q8NGU9 434 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 LRTOMTQ8WZ04 291 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TFGQ92734 400 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TANKQ92844 425 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 MR1Q95460 341 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZUFSPQ96AP4 578 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 MED8Q96G25 268 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TCEAL2Q9H3H9 227 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRDM8Q9NQV8 689 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 INTS7Q9NVH2 962 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TMCO1Q9UM00 188 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KCTD3Q9Y597 815 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRUNE2Q8WUY3 3088 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TNRC18O15417 2968 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 H3BSA7 217 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 UPK1AO00322 258 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 NME4O00746 187 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TNFRSF10CO14798 259 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 CD3EAPO15446 510 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 HTRA2O43464 458 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PRSS23O95084 383 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 TNFAIP8O95379 198 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 BMP10O95393 424 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 IMPDH1P20839 514 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PREPP48147 710 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 GLRBP48167 497 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 ARSDP51689 593 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 SH3BP2P78314 561 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 FZD2Q14332 565 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 SQLEQ14534 574 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KANK2Q63ZY3 851 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KLC3Q6P597 504 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KIAA0907Q7Z7F0 614 aaPredicted RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 GOLM1Q8NBJ4 401 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 OR4C6Q8NH72 309 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 KCNE4Q8WWG9 221 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 FUBP1Q96AE4 644 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 EFCAB1Q9HAE3 211 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 CAPN10Q9HC96 672 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 ZDHHC3Q9NYG2 299 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 CNOT6Q9ULM6 557 aaKnown RBP7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 ACOT9Q9Y305 439 aa7.15□□□□□ -1.26
CDC42BPA-208ENST00000442054 RALGAPA1Q6GYQ0 2036 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 KIR2DS5A0A0G2JLQ3 304 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 A0A0G2JNG1 304 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 KIR2DS3K7RE56 304 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 PPP6CO00743 305 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 IPO13O94829 963 aaKnown RBP7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 MATN4O95460 622 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 HSD17B1P14061 328 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 BPIP17213 487 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 HMGCLP35914 325 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD151P48509 253 aa7.15□□□□□ -1.27
CDC42BPA-208ENST00000442054 CLDN6P56747 220 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms