RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TGDSO95455 350 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TOMM40O96008 361 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 IL1BP01584 269 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CHRNA1P02708 482 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 C1QAP02745 245 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TROVE2P10155 538 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ODC1P11926 461 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CYBAP13498 195 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCNB1P14635 433 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ERCC2P18074 760 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGAM1P18669 254 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DRD1P21728 446 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRKCHP24723 683 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 EPHA8P29322 1005 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 GGT5P36269 586 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MLH1P40692 756 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SKIV2L2P42285 1042 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEA3P43357 314 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 THBS3P49746 956 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RASSF2P50749 326 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CLCNKBP51801 687 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MNAT1P51948 309 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGGT1BP53609 377 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TPI1P60174 286 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 NCALDP61601 193 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAE1P78406 368 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MGAT3Q09327 533 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 AP1B1Q10567 949 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 WASHC5Q12768 1159 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SREBF2Q12772 1141 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 NME3Q13232 169 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 NAB1Q13506 487 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RIPK1Q13546 671 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DPYSQ14117 519 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRPSAP1Q14558 356 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SNCBQ16143 134 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 AASDHQ4L235 1098 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM196Q5HYL7 178 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAB41Q5JT25 222 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 C1QTNF12Q5T7M4 302 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 OTUD1Q5VV17 481 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARMC3Q5W041 872 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM90A2PQ658T7 463 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RUSC1-AS1Q66K80 236 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 STEAP4Q687X5 459 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CYB5D1Q6P9G0 228 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DCLRE1AQ6PJP8 1040 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CXCL17Q6UXB2 119 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TIFABQ6ZNK6 161 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DENND5BQ6ZUT9 1274 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF534Q76KX8 674 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 LRRC8DQ7L1W4 858 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PID1Q7Z2X4 250 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC91Q7Z6B0 441 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PIP4P1Q86T03 277 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RPAINQ86UA6 219 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERINC5Q86VE9 423 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ADHFE1Q8IWW8 467 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 THEM5Q8N1Q8 247 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SCML4Q8N228 414 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 NKAIN3Q8N8D7 197 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM47BQ8NA70 645 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCNYQ8ND76 341 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ADPRHL1Q8NDY3 354 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRPV1Q8NER1 839 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEC3Q8TD91 643 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 DEPDC1BQ8WUY9 529 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 C10orf82Q8WW14 230 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 IRGQQ8WZA9 623 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDKL2Q92772 493 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLHL29Q96CT2 875 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 MTBPQ96DY7 904 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGAP3Q96FM1 320 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 THOC1Q96FV9 657 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRMT61AQ96FX7 289 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PCED1BQ96HM7 432 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 OXNAD1Q96HP4 312 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RMDN2Q96LZ7 410 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 GAD1Q99259 594 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 LGMNQ99538 433 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACBD6Q9BR61 282 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM204Q9BSN7 226 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 NAT9Q9BTE0 207 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRIM62Q9BVG3 475 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ITPAQ9BY32 194 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 IQCGQ9H095 443 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CCDC68Q9H2F9 335 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 RMI1Q9H9A7 625 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 BRF2Q9HAW0 419 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 CNGB3Q9NQW8 809 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PIGVQ9NUD9 493 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 LIN7CQ9NUP9 197 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMLHEQ9NVH6 421 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 TMEM51Q9NW97 253 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEPT10Q9P0V9 454 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEMA5BQ9P283 1151 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 SLC17A7Q9P2U7 560 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms