RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TRIM55Q9BYV6 548 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 GPAMQ9HCL2 828 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 ACSS2Q9NR19 701 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 TLK1Q9UKI8 766 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 MTO1Q9Y2Z2 717 aaKnown RBP22.94■■□□□ 1.26
CPNE1-217ENST00000439669 MAU2Q9Y6X3 613 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 ANKRD12Q6UB98 2062 aa22.94■■□□□ 1.26
CPNE1-217ENST00000439669 HEATR5BQ9P2D3 2071 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CTAGE15A4D2H0 777 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CNOT3O75175 753 aaKnown RBP22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CTAGE8P0CG41 777 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 HRH2P25021 359 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 STX2P32856 288 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 OR1D4P47884 311 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 POU4F1Q01851 419 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 PRTGQ2VWP7 1150 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 LACTB2Q53H82 288 aaPredicted RBP22.93■■□□□ 1.26
CPNE1-217ENST00000439669 SBSNQ6UWP8 590 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CYS1Q717R9 158 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 PRICKLE2Q7Z3G6 844 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CTAGE6Q86UF2 777 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CTAGE4Q8IX94 777 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 MMGT1Q8N4V1 131 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 PPM1NQ8N819 430 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 ATL1Q8WXF7 558 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 TSPAN17Q96FV3 270 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 C10orf90Q96M02 699 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 OR2A5Q96R48 311 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 RBBP8Q99708 897 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 SGPP1Q9BX95 441 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 ING2Q9H160 280 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 SYNPO2LQ9H987 977 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CAB39LQ9H9S4 337 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 POPDC3Q9HBV1 291 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 LRRC4CQ9HCJ2 640 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 TMEM184CQ9NVA4 438 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 SH2B3Q9UQQ2 575 aa22.93■■□□□ 1.26
CPNE1-217ENST00000439669 CDC7O00311 574 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 MED26O95402 600 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 RELAQ04206 551 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 ATP1A4Q13733 1029 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 USP10Q14694 798 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 SSPNQ14714 243 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 HKDC1Q2TB90 917 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 KBTBD12Q3ZCT8 623 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 LCTLQ6UWM7 567 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 COX15Q7KZN9 410 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 OVCH1Q7RTY7 1134 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 PTRH1Q86Y79 214 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 NOA1Q8NC60 698 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 FBF1Q8TES7 1133 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 ANKRD49Q8WVL7 239 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 COL26A1Q96A83 441 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 PYCR2Q96C36 320 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 FBXL8Q96CD0 374 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 HAUS8Q9BT25 410 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 ZDHHC18Q9NUE0 388 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 NOVA2Q9UNW9 492 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 RUVBL1Q9Y265 456 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 TP53TG5Q9Y2B4 290 aa22.92■■□□□ 1.26
CPNE1-217ENST00000439669 SMG1Q96Q15 3661 aaKnown RBP22.92■■□□□ 1.26
CPNE1-217ENST00000439669 SLC28A2O43868 658 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 CDH1P12830 882 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 CCL11P51671 97 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 PRMT9Q6P2P2 845 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 FRA10AC1Q70Z53 315 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 MRGPREQ86SM8 312 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 OR56A3Q8NH54 315 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 KIF18AQ8NI77 898 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 ANKRD7Q92527 254 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 PTERQ96BW5 349 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 GPR22Q99680 433 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 ZNF304Q9HCX3 659 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 CTNNAL1Q9UBT7 734 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 CTSFQ9UBX1 484 aa22.91■■□□□ 1.26
CPNE1-217ENST00000439669 TXNDC9O14530 226 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 PHGDHO43175 533 aaKnown RBP22.9■■□□□ 1.26
CPNE1-217ENST00000439669 ONECUT2O95948 504 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 C1QAP02745 245 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 ALBP02768 609 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 STATHP02808 62 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 PLA2G2AP14555 144 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 NR1D1P20393 614 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 EMP3P54852 163 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 RPS15AP62244 130 aaKnown RBP22.9■■□□□ 1.26
CPNE1-217ENST00000439669 CSNK1G2P78368 415 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 PPP1R3AQ16821 1122 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 IP6K3Q96PC2 410 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 EGFL8Q99944 293 aa22.9■■□□□ 1.26
CPNE1-217ENST00000439669 UNKQ9C0B0 810 aaKnown RBP22.9■■□□□ 1.26
CPNE1-217ENST00000439669 MTRF1LQ9UGC7 380 aaKnown RBP22.9■■□□□ 1.26
CPNE1-217ENST00000439669 NXT1Q9UKK6 140 aaKnown RBP22.9■■□□□ 1.26
CPNE1-217ENST00000439669 PEX12O00623 359 aa22.89■■□□□ 1.25
CPNE1-217ENST00000439669 P2RX6O15547 441 aa22.89■■□□□ 1.25
CPNE1-217ENST00000439669 UMODP07911 640 aa22.89■■□□□ 1.25
CPNE1-217ENST00000439669 STMN1P16949 149 aa22.89■■□□□ 1.25
CPNE1-217ENST00000439669 FBLP22087 321 aaKnown RBP22.89■■□□□ 1.25
CPNE1-217ENST00000439669 SPRP35270 261 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-217ENST00000439669 RRADP55042 308 aa22.89■■□□□ 1.25
CPNE1-217ENST00000439669 EFTUD2Q15029 972 aaKnown RBP eCLIP22.89■■□□□ 1.254e-8■■■■■ 37.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms