RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SH3KBP1Q96B97 665 aa8.79□□□□□ -1
COPB1-202ENST00000439561 DHRS1Q96LJ7 313 aa8.79□□□□□ -1
COPB1-202ENST00000439561 DNMT3BQ9UBC3 853 aaKnown RBP8.79□□□□□ -1
COPB1-202ENST00000439561 MKLN1Q9UL63 735 aa8.79□□□□□ -1
COPB1-202ENST00000439561 SATB2Q9UPW6 733 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PCDHB5Q9Y5E4 795 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FAM220BPB1ANY3 271 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PEX11BO96011 259 aa8.79□□□□□ -1
COPB1-202ENST00000439561 TRBC1P01850 177 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ITGAMP11215 1152 aa8.79□□□□□ -1
COPB1-202ENST00000439561 HOXD8P13378 290 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 HOXD11P31277 338 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 SSTR4P31391 388 aa8.79□□□□□ -1
COPB1-202ENST00000439561 CDC42P60953 191 aa8.79□□□□□ -1
COPB1-202ENST00000439561 OLR1P78380 273 aa8.79□□□□□ -1
COPB1-202ENST00000439561 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 VMACQ2NL98 169 aa8.79□□□□□ -1
COPB1-202ENST00000439561 C10orf62Q5T681 223 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
COPB1-202ENST00000439561 TRIQKQ629K1 86 aa8.79□□□□□ -1
COPB1-202ENST00000439561 GLB1LQ6UWU2 654 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KRT73Q86Y46 540 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ZZZ3Q8IYH5 903 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ELMOD1Q8N336 334 aa8.79□□□□□ -1
COPB1-202ENST00000439561 GPR150Q8NGU9 434 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PIH1D2Q8WWB5 315 aa8.79□□□□□ -1
COPB1-202ENST00000439561 TMCO6Q96DC7 493 aa8.79□□□□□ -1
COPB1-202ENST00000439561 MGLLQ99685 303 aa8.79□□□□□ -1
COPB1-202ENST00000439561 RTP3Q9BQQ7 232 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ASPNQ9BXN1 380 aa8.79□□□□□ -1
COPB1-202ENST00000439561 CSNK1G1Q9HCP0 422 aa8.79□□□□□ -1
COPB1-202ENST00000439561 COQ3Q9NZJ6 369 aa8.79□□□□□ -1
COPB1-202ENST00000439561 RAB23Q9ULC3 237 aa8.79□□□□□ -1
COPB1-202ENST00000439561 CFL2Q9Y281 166 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FCF1Q9Y324 198 aaKnown RBP8.79□□□□□ -1
COPB1-202ENST00000439561 TRPV2Q9Y5S1 764 aa8.79□□□□□ -1
COPB1-202ENST00000439561 A0A1W2PQ72 361 aa8.79□□□□□ -1
COPB1-202ENST00000439561 HAS3O00219 553 aa8.79□□□□□ -1
COPB1-202ENST00000439561 SOX14O95416 240 aa8.79□□□□□ -1
COPB1-202ENST00000439561 F2P00734 622 aa8.79□□□□□ -1
COPB1-202ENST00000439561 NUDT7P0C024 238 aa8.79□□□□□ -1
COPB1-202ENST00000439561 BMPR1AP36894 532 aa8.79□□□□□ -1
COPB1-202ENST00000439561 IFITM2Q01629 132 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KEAP1Q14145 624 aa8.79□□□□□ -1
COPB1-202ENST00000439561 STARD3Q14849 445 aa8.79□□□□□ -1
COPB1-202ENST00000439561 QPRTQ15274 297 aa8.79□□□□□ -1
COPB1-202ENST00000439561 LRRC26Q2I0M4 334 aa8.79□□□□□ -1
COPB1-202ENST00000439561 MANEALQ5VSG8 457 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FAM171A1Q5VUB5 890 aa8.79□□□□□ -1
COPB1-202ENST00000439561 PLET1Q6UQ28 207 aa8.79□□□□□ -1
COPB1-202ENST00000439561 MSRB3Q8IXL7 192 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ENTHD1Q8IYW4 607 aa8.79□□□□□ -1
COPB1-202ENST00000439561 NLGN4XQ8N0W4 816 aa8.79□□□□□ -1
COPB1-202ENST00000439561 CYP4Z2PQ8N1L4 340 aa8.79□□□□□ -1
COPB1-202ENST00000439561 SLC5A8Q8N695 610 aa8.79□□□□□ -1
COPB1-202ENST00000439561 ISG20Q96AZ6 181 aaKnown RBP8.79□□□□□ -1
COPB1-202ENST00000439561 CCDC115Q96NT0 180 aa8.79□□□□□ -1
COPB1-202ENST00000439561 BCL7BQ9BQE9 202 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KCNH6Q9H252 994 aa8.79□□□□□ -1
COPB1-202ENST00000439561 MAGIXQ9H6Y5 334 aa8.79□□□□□ -1
COPB1-202ENST00000439561 RANGRFQ9HD47 186 aaPredicted RBP8.79□□□□□ -1
COPB1-202ENST00000439561 IL1RAPQ9NPH3 570 aa8.79□□□□□ -1
COPB1-202ENST00000439561 CLN6Q9NWW5 311 aa8.79□□□□□ -1
COPB1-202ENST00000439561 FZD4Q9ULV1 537 aa8.79□□□□□ -1
COPB1-202ENST00000439561 KMOO15229 486 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SLITRK5O94991 958 aa8.78□□□□□ -1
COPB1-202ENST00000439561 C1QCP02747 245 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CHRNB1P11230 501 aa8.78□□□□□ -1
COPB1-202ENST00000439561 GKP32189 559 aa8.78□□□□□ -1
COPB1-202ENST00000439561 IFNA8P32881 189 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TIE1P35590 1138 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CHI3L1P36222 383 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 HTR2BP41595 481 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ZNF140P52738 457 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 GNG2P59768 71 aa8.78□□□□□ -1
COPB1-202ENST00000439561 TUSC3Q13454 348 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SDE2Q6IQ49 451 aa8.78□□□□□ -1
COPB1-202ENST00000439561 UBE2R2Q712K3 238 aaPredicted RBP8.78□□□□□ -1
COPB1-202ENST00000439561 TRIM69Q86WT6 500 aa8.78□□□□□ -1
COPB1-202ENST00000439561 ZBTB2Q8N680 514 aa8.78□□□□□ -1
COPB1-202ENST00000439561 OR9Q2Q8NGE9 314 aa8.78□□□□□ -1
COPB1-202ENST00000439561 NPLOC4Q8TAT6 608 aa8.78□□□□□ -1
COPB1-202ENST00000439561 DPF3Q92784 378 aa8.78□□□□□ -1
COPB1-202ENST00000439561 COL21A1Q96P44 957 aa8.78□□□□□ -1
COPB1-202ENST00000439561 FYTTD1Q96QD9 318 aaKnown RBP8.78□□□□□ -1
COPB1-202ENST00000439561 OSGIN1Q9UJX0 560 aa8.78□□□□□ -1
COPB1-202ENST00000439561 PCDHGB3Q9Y5G1 929 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CLDN24A6NM45 220 aa8.78□□□□□ -1
COPB1-202ENST00000439561 FZD9O00144 591 aa8.78□□□□□ -1
COPB1-202ENST00000439561 MYL12BO14950 172 aa8.78□□□□□ -1
COPB1-202ENST00000439561 AREL1O15033 823 aa8.78□□□□□ -1
COPB1-202ENST00000439561 APOL3O95236 402 aa8.78□□□□□ -1
COPB1-202ENST00000439561 EPOP01588 193 aa8.78□□□□□ -1
COPB1-202ENST00000439561 GBAP04062 536 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SOX3P41225 446 aa8.78□□□□□ -1
COPB1-202ENST00000439561 SUOXP51687 545 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CRISP3P54108 245 aa8.78□□□□□ -1
COPB1-202ENST00000439561 UGT2B15P54855 530 aa8.78□□□□□ -1
COPB1-202ENST00000439561 CACNG1Q06432 222 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms