RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 TRAF7Q6Q0C0 670 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ZNF433Q8N7K0 673 aaPredicted RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 POP5Q969H6 163 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 CENPMQ9NSP4 180 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 P2RX2Q9UBL9 471 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 IGKV6D-21A0A0A0MT36 114 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TBX1O43435 398 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CLPTM1O96005 669 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 DBIP07108 87 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 DCNP07585 359 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 LCN1P1Q5VSP4 162 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TANGO2Q6ICL3 276 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ISLR2Q6UXK2 745 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 GPAT4Q86UL3 456 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CCDC54Q8NEL0 328 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 VN1R2Q8NFZ6 395 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 WDR77Q9BQA1 342 aaPredicted RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 IGKV6-21A0A0C4DH24 114 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 STX16O14662 325 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SEC24AO95486 1093 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ACADLP28330 430 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CD38P28907 300 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 MYBPC3Q14896 1274 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 RTL10Q7L3V2 364 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 AMIGO2Q86SJ2 522 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ZNF100Q8IYN0 542 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CMASQ8NFW8 434 aaPredicted RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 OR6K6Q8NGW6 343 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SLC22A8Q8TCC7 542 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 RADILQ96JH8 1075 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CLSTN3Q9BQT9 956 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 LRMDAQ9H2I8 198 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 IL1RAPQ9NPH3 570 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 BRD7Q9NPI1 651 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SLAMF7Q9NQ25 335 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SLC39A1Q9NY26 324 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ZNF180Q9UJW8 692 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 DNMT3AQ9Y6K1 912 aaPredicted RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FAM72CH0Y354 149 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ACVR2AP27037 513 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 PLCXD2Q0VAA5 305 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SCARB2Q14108 478 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 DEFB110Q30KQ9 67 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 VWA5B1Q5TIE3 1220 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FAM72AQ5TYM5 149 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FAM72DQ6L9T8 149 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 RNF111Q6ZNA4 994 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SATL1Q86VE3 508 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 LRRTM3Q86VH5 581 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FAM72BQ86X60 149 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SLC34A3Q8N130 599 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TMEM130Q8N3G9 435 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SLC46A2Q9BY10 475 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 MRPS26Q9BYN8 205 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 TESMINQ9Y4I5 508 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 OAS3Q9Y6K5 1087 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 IRGMA1A4Y4 181 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TCEA3O75764 348 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 PBX1P40424 430 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 CHAF1BQ13112 559 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TRIM25Q14258 630 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 MED22Q15528 200 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 WASHC2DQ5SRD0 308 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SPPL2CQ8IUH8 684 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 HORMAD2Q8N7B1 307 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FAM47BQ8NA70 645 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 GATSQ8NAP1 163 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 OR10A6Q8NH74 314 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 IL17FQ96PD4 163 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 OR1F2PQ96R84 312 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SLCO1B3Q9NPD5 702 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 PRODH2Q9UF12 536 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ENTPD5O75356 428 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SIX3O95343 332 aaPredicted RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 AHSA1O95433 338 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 POU2F1P14859 743 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ANPEPP15144 967 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 HERVK_113P63132 956 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 GRM7Q14831 915 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 DEFB134Q4QY38 66 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 KLHL26Q53HC5 615 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ARL14Q8N4G2 192 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 OR2L5Q8NG80 312 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 PLEKHO2Q8TD55 490 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 GTPBP3Q969Y2 492 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 SH3GL3Q99963 347 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 APOOQ9BUR5 198 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ERVK-6Q9BXR3 956 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TRIM2Q9C040 744 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 TIGARQ9NQ88 270 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms