RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 C11orf74Q86VG3 221 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 SLC5A8Q8N695 610 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PAF1Q8N7H5 531 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 KBTBD8Q8NFY9 601 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 MCCC1Q96RQ3 725 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-204ENST00000438964 PEX16Q9Y5Y5 336 aa12.99□□□□□ -0.33
ACTN1-204ENST00000438964 TBKBP1A7MCY6 615 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 TAPBPO15533 448 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 APOL3O95236 402 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CLEC2LP0C7M8 214 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 ENGP17813 658 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 LHX1P48742 406 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 NKAPQ8N5F7 415 aaKnown RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 WDR36Q8NI36 951 aaKnown RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 SKA2Q8WVK7 121 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 ZYG11BQ9C0D3 744 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CCNB1IP1Q9NPC3 277 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CLEC2DQ9UHP7 191 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 PSORS1C1Q9UIG5 152 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CCL27Q9Y4X3 112 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 PCDHB5Q9Y5E4 795 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 FNDC1Q4ZHG4 1894 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 PIKFYVEQ9Y2I7 2098 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 IGLV3-25P01717 112 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 IL7P13232 177 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 FPR1P21462 350 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 SOX6P35712 828 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CYP4F8P98187 520 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF33AQ06730 810 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 GANABQ14697 944 aaKnown RBP12.98□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF79Q15937 498 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 TYSND1Q2T9J0 566 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 SLX4IPQ5VYV7 408 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 DNAJC22Q8N4W6 341 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 B3GNT7Q8NFL0 401 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 PANX1Q96RD7 426 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CIPCQ9C0C6 399 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CLPBQ9H078 707 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 NARFLQ9H6Q4 476 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 LATS2Q9NRM7 1088 aa12.98□□□□□ -0.33
ACTN1-204ENST00000438964 CAPN5O15484 640 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 GZMMP51124 257 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CDH12P55289 794 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ARMC12Q5T9G4 340 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PXDC1Q5TGL8 231 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SBSNQ6UWP8 590 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CCDC190Q86UF4 302 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 FAM20CQ8IXL6 584 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 BCL7BQ9BQE9 202 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CLMPQ9H6B4 373 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ABCC13Q9NSE7 274 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SPASTQ9UBP0 616 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 DUSP12Q9UNI6 340 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 RGS14O43566 566 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TMCC2O75069 709 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ERN1O75460 977 aaKnown RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CDK1P06493 297 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 THP07101 528 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 DDX5P17844 614 aaKnown RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TBX4P57082 545 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 BTBD16Q32M84 506 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 GPAT3Q53EU6 434 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ZC3H12BQ5HYM0 836 aaKnown RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 FAM151BQ6UXP7 276 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 LINC00299Q6ZSB3 139 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ZNF605Q86T29 641 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PEX5LQ8IYB4 626 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 AADATQ8N5Z0 425 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 YIPF7Q8N8F6 280 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 RNF170Q96K19 258 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PPP3R2Q96LZ3 170 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 MGLLQ99685 303 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ASPNQ9BXN1 380 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 ACPTQ9BZG2 426 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 C11orf54Q9H0W9 315 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 IMPAD1Q9NX62 359 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 CLIC1O00299 241 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 IFRD1O00458 451 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-204ENST00000438964 WDR47O94967 919 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 SLITRK5O94991 958 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 PDYNP01213 254 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 FGF1P05230 155 aa12.97□□□□□ -0.33
ACTN1-204ENST00000438964 IGFBP1P08833 259 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms