RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 CD9P21926 228 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 OC90Q02509 493 aaPredicted RBP8.18□□□□□ -1.1
SCRN1-208ENST00000438497 PMPCAQ10713 525 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 WASHC5Q12768 1159 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 MPP3Q13368 585 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 TAZQ16635 292 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 MAPKAPK3Q16644 382 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 MEP1AQ16819 746 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 BTBD16Q32M84 506 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 BZW1Q7L1Q6 419 aaKnown RBP8.18□□□□□ -1.1
SCRN1-208ENST00000438497 FGD2Q7Z6J4 655 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 SERPINA9Q86WD7 417 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 RFX6Q8HWS3 928 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 TMTC1Q8IUR5 882 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 OR4N4Q8N0Y3 316 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 MARVELD2Q8N4S9 558 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 HORMAD2Q8N7B1 307 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 LINC01555Q8NAE3 123 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 OR13C4Q8NGS5 318 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 FAM57AQ8TBR7 257 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 METTL21AQ8WXB1 218 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 ELMO1Q92556 727 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 RMND5BQ96G75 393 aaPredicted RBP8.18□□□□□ -1.1
SCRN1-208ENST00000438497 FRMD6Q96NE9 622 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 OLFM3Q96PB7 478 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 FSD1LQ9BXM9 530 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 LRFN1Q9P244 771 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 KLHL8Q9P2G9 620 aaPredicted RBP8.18□□□□□ -1.1
SCRN1-208ENST00000438497 CPSF2Q9P2I0 782 aaKnown RBP8.18□□□□□ -1.1
SCRN1-208ENST00000438497 IMPACTQ9P2X3 320 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 CSPG4Q6UVK1 2322 aa8.18□□□□□ -1.1
SCRN1-208ENST00000438497 IGLV3-16A0A075B6K0 115 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 FAM171A2A8MVW0 826 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 ZNF487B1APH4 448 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 PRPF4O43172 522 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 SEC24DO94855 1032 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CRTAMO95727 393 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 HEXAP06865 529 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 ACRV1P26436 265 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 PKLRP30613 574 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 MC4RP32245 332 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 PTGER1P34995 402 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 DYNLT1P63172 113 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 PLOD1Q02809 727 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 RNFT1Q5M7Z0 435 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 E4F1Q66K89 784 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 ARSKQ6UWY0 536 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 HDXQ7Z353 690 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CPEB2Q7Z5Q1 589 aaKnown RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 KIAA1328Q86T90 577 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 TAX1BP1Q86VP1 789 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CRLF3Q8IUI8 442 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CCDC50Q8IVM0 306 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 ZZZ3Q8IYH5 903 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 ZNF567Q8N184 647 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 OR10Q1Q8NGQ4 319 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 OR2L8Q8NGY9 312 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 TFB1MQ8WVM0 346 aaKnown RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 MMABQ96EY8 250 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CABS1Q96KC9 395 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CYTH2Q99418 400 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 GPATCH1Q9BRR8 931 aaKnown RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 FICDQ9BVA6 458 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 TGIF2Q9GZN2 237 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CLEC4MQ9H2X3 399 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 TP63Q9H3D4 680 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 MKKSQ9NPJ1 570 aaPredicted RBP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 RASSF1Q9NS23 344 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 C14orf105Q9NVL8 296 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 SMARCAL1Q9NZC9 954 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CTTNBP2NLQ9P2B4 639 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCRN1-208ENST00000438497 CIDEBQ9UHD4 219 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 SLC39A10Q9ULF5 831 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
SCRN1-208ENST00000438497 COL6A5A8TX70 2615 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 IGHV3-20A0A0C4DH32 117 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 TRBV5-4A0A0C4DH59 114 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 SLC5A10A0PJK1 596 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 CCDC151A5D8V7 595 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 CCL22O00626 93 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 PRMT3O60678 531 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 ERLIN1O75477 346 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 AP2A2O94973 939 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 FKBP9O95302 570 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 LY6G6DO95868 133 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 ANXA5P08758 320 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 PRSS56P0CW18 603 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 C8orf89P0DMQ9 161 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 ERVK-10P10266 1014 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 ZNF24P17028 368 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 PCSK6P29122 969 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 SLC26A3P40879 764 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 GEMP55040 296 aa8.16□□□□□ -1.1
SCRN1-208ENST00000438497 CSE1LP55060 971 aaKnown RBP8.16□□□□□ -1.1
SCRN1-208ENST00000438497 DLX5P56178 289 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms