RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FTSJ1Q9UET6 329 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 UTS2RQ9UKP6 389 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 NUP50Q9UKX7 468 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CCNKO75909 580 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 P04436 131 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 PRPS1L1P21108 318 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 RGS19P49795 217 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SMSP52788 366 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 PRKCZQ05513 592 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SCARB2Q14108 478 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 SLC36A3Q495N2 470 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CNTD1Q8N815 330 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF599Q96NL3 588 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 NECTIN4Q96NY8 510 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TLR6Q9Y2C9 796 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 TIMM22Q9Y584 194 aa10.92□□□□□ -0.66
SCN4A-201ENST00000435607 CLDN25C9JDP6 229 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 FBLP22087 321 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 SIM2Q14190 667 aaPredicted RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ERN2Q76MJ5 926 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 COQ8AQ8NI60 647 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ELP5Q8TE02 316 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TMCO6Q96DC7 493 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 FAM198AQ9UFP1 575 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF175Q9Y473 711 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TMX2-CTNND1H3BSU7 103 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 PIP5K1BO14986 540 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ARL6IP5O75915 188 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 IQCCQ4KMZ1 466 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TSTD2Q5T7W7 516 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ZDHHC21Q8IVQ6 265 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 OR5B17Q8NGF7 314 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 OR8H1Q8NGG4 311 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 RELTQ969Z4 430 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GOLGA2P5Q9HBQ8 144 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ACSL5Q9ULC5 683 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ARHGAP23Q9P227 1491 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 AIREO43918 545 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 KCNJ13O60928 360 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 RAC2P15153 192 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 DSTNP60981 165 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 PSPHP78330 225 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 NPTX1Q15818 432 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 PRSS55Q6UWB4 352 aaPredicted RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 NAXEQ8NCW5 288 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 DAZLQ92904 295 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 FABP12A6NFH5 140 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GPR89AB7ZAQ6 455 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 HTR1AP08908 422 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GPR89BP0CG08 455 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TLE2Q04725 743 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GBX1Q14549 363 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GEMIN6Q8WXD5 167 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 KCTD15Q96SI1 283 aaPredicted RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 VPS29Q9UBQ0 182 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 RAB26Q9ULW5 256 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ICKQ9UPZ9 632 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 MAFKO60675 156 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 RPS21P63220 83 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 EML3Q32P44 896 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM41AQ96HV5 264 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 PCDHB18PQ96TA0 734 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TAS2R9Q9NYW1 312 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF224Q9NZL3 707 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 M0R036 132 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ALDOAP04075 364 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 CSTF1Q05048 431 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 GK5Q6ZS86 529 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TMPRSS9Q7Z410 1059 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF283Q8N7M2 679 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 OR4E2Q8NGC2 313 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 HNRNPABQ99729 332 aaKnown RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 SLC2A11Q9BYW1 496 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 TRIM36Q9NQ86 728 aa10.91□□□□□ -0.66
SCN4A-201ENST00000435607 SMPD3Q9NY59 655 aaPredicted RBP10.91□□□□□ -0.66
SCN4A-201ENST00000435607 NCOA3Q9Y6Q9 1424 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 APBB3O95704 486 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 RPLP0P05388 317 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ANXA8P13928 327 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 S100PP25815 95 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SHMT2P34897 504 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ST3GAL3Q11203 375 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 GNMTQ14749 295 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 RALGPS1Q5JS13 557 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TMEM198Q66K66 360 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 NYAP1Q6ZVC0 841 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRD46Q86W74 232 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 SPRYD4Q8WW59 207 aaPredicted RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 NXNL1Q96CM4 212 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 MTERF1Q99551 399 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TNFRSF10DQ9UBN6 386 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 BTNL10A8MVZ5 291 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 OXSR1O95747 527 aaPredicted RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 RPL7AP62424 266 aaKnown RBP10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TIGD6Q17RP2 521 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 ADGRF1Q5T601 910 aa10.9□□□□□ -0.66
SCN4A-201ENST00000435607 TRIB2Q92519 343 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms