RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 HSD17B2P37059 387 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 GP5P40197 560 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 GDF5P43026 501 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 UCNP55089 124 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 VSX2P58304 361 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 RPS18P62269 152 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 POU4F1Q01851 419 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MEF2AQ02078 507 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 PRDX1Q06830 199 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 ABHD18Q0P651 414 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NAE1Q13564 534 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 BMPR2Q13873 1038 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CSHL1Q14406 222 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLMAPQ14BN4 828 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 C18orf21Q32NC0 220 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 FAM153CQ494X1 144 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TAF1BQ53T94 588 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 FBXO48Q5FWF7 155 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 WASHC2DQ5SRD0 308 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TEX35Q5T0J7 233 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MROH9Q5TGP6 573 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MLIPQ5VWP3 458 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 ICE2Q659A1 982 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 LRRC8EQ6NSJ5 796 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 INO80CQ6PI98 192 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TTLL10Q6ZVT0 673 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CYS1Q717R9 158 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CMC1Q7Z7K0 106 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 GSPT2Q8IYD1 628 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 LRRC56Q8IYG6 542 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 DTWD1Q8N5C7 304 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NKAPQ8N5F7 415 aaKnown RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 FBXO15Q8NCQ5 510 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 HMGCLL1Q8TB92 370 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CT55Q8WUE5 264 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 EXTL1Q92935 676 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 EXT2Q93063 718 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 TSPAN17Q96FV3 270 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CITED4Q96RK1 184 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 FMO2Q99518 471 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 EGFL8Q99944 293 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MACROD1Q9BQ69 325 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 SELENOSQ9BQE4 189 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 YIPF2Q9BWQ6 316 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC12A9Q9BXP2 914 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CHST8Q9H2A9 424 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 SLC6A20Q9NP91 592 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 PCMTD2Q9NV79 361 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CUEDC1Q9NWM3 386 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 CORO1CQ9ULV4 474 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 NCOR2Q9Y618 2525 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 AKAP13Q12802 2813 aa5.53□□□□□ -1.52
HMGB3P24-201ENST00000433260 MDC1Q14676 2089 aaKnown RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 SCN3AQ9NY46 2000 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF839A8K0R7 811 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 H0YGG7 62 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TERTO14746 1132 aaKnown RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 CREG1O75629 220 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ANXA5P08758 320 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 HBQ1P09105 142 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 SPTBP11277 2137 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 CD1DP15813 335 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 NPPBP16860 134 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ZNF37AP17032 561 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TYK2P29597 1187 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 STAT5AP42229 794 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 MSH2P43246 934 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 OR1D4P47884 311 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 GLRBP48167 497 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 KCNC1P48547 511 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 PMS2P54278 862 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 FOXL2P58012 376 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 RAB10P61026 200 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ARF3P61204 181 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TBPL1P62380 186 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 RPS15P62841 145 aaKnown RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 IRF9Q00978 393 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TNP2Q05952 138 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 DLG1Q12959 904 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 DNASE1L3Q13609 305 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 LY6DQ14210 128 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 MAP7Q14244 749 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ARHGAP19Q14CB8 494 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TSNQ15631 228 aaKnown RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 DEFB109BQ30KR1 87 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 LINC00303Q3SY05 128 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 PRAMEF13Q5VWM6 474 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 CAPN13Q6MZZ7 669 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TLDC1Q6P9B6 456 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 SBSNQ6UWP8 590 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 SHISA6Q6ZSJ9 500 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 CEP128Q6ZU80 1094 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 FRA10AC1Q70Z53 315 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 PAQR7Q86WK9 346 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 TMEM151BQ8IW70 566 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 DSELQ8IZU8 1212 aa5.52□□□□□ -1.53
HMGB3P24-201ENST00000433260 ENDOVQ8N8Q3 282 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms