RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TEKT4Q8WW24 435 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 FAM71F1Q96KD3 344 aaPredicted RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 DGAT2Q96PD7 388 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 GCNAQ96QF7 691 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 ANKEF1Q9NU02 776 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 PRMT7Q9NVM4 692 aaPredicted RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 CWC25Q9NXE8 425 aaPredicted RBP2.78□□□□□ -1.96
CLK1-204ENST00000432425 RPS6KA6Q9UK32 745 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.78□□□□□ -1.96
CLK1-204ENST00000432425 CHKBQ9Y259 395 aa2.78□□□□□ -1.96
CLK1-204ENST00000432425 A0A087WUV0 522 aaPredicted RBP2.77□□□□□ -1.97
CLK1-204ENST00000432425 A0A1W2PPQ1 181 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 PI4K2BG5E9Z4 385 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 KRT33AO76009 404 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 HPRP00739 348 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 IGHV3-13P01766 116 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 THEGLP0DJG4 465 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 VAMP7P51809 220 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 ROR1Q01973 937 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 COX10Q12887 443 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 SGCGQ13326 291 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 MTF1Q14872 753 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 CDC37Q16543 378 aaPredicted RBP2.77□□□□□ -1.97
CLK1-204ENST00000432425 SPATA1Q5VX52 437 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 OR4A47Q6IF82 309 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 ZER1Q7Z7L7 766 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 LSMEM1Q8N8F7 131 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 OR7A2PQ8NGA2 310 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 OR5T2Q8NGG2 359 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 OR10Q1Q8NGQ4 319 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 SLC45A3Q96JT2 553 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 ABHD1Q96SE0 405 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 KLHL4Q9C0H6 718 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 NOL11Q9H8H0 719 aaKnown RBP2.77□□□□□ -1.97
CLK1-204ENST00000432425 TP53TG3Q9ULZ0 132 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 PA2G4Q9UQ80 394 aaKnown RBP2.77□□□□□ -1.97
CLK1-204ENST00000432425 WDR83OSQ9Y284 106 aa2.77□□□□□ -1.97
CLK1-204ENST00000432425 LOC105371242A0A075B767 164 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 hCG_1809904A0A1W2PP81 198 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 A0A1W2PPE2 198 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 A0A1W2PR64 198 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 AHCYL1O43865 530 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 GP1BBP13224 206 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 NNMTP40261 264 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TRAP1Q12931 704 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 PEX6Q13608 980 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TRIM29Q14134 588 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 LY6DQ14210 128 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TAB1Q15750 504 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 EXT1Q16394 746 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 PLBD1Q6P4A8 553 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 CAMKMTQ7Z624 323 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 RPAINQ86UA6 219 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TDRD5Q8NAT2 981 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 LRRC15Q8TF66 581 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 CCDC3Q9BQI4 270 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 APOL6Q9BWW8 343 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 HOXD1Q9GZZ0 328 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 Q9H8V8 135 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 PIH1D3Q9NQM4 214 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 OLAHQ9NV23 265 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 FAM120CQ9NX05 1096 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 GIMAP2Q9UG22 337 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 RNF150Q9ULK6 438 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 WIPI2Q9Y4P8 454 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 MAGED1Q9Y5V3 778 aaPredicted RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 SELENOKQ9Y6D0 94 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TRIM77I1YAP6 450 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 K7ENM7 598 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TFECO14948 347 aaPredicted RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 PCGF2P35227 344 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 LHX1P48742 406 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 ASCL1P50553 236 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 IRX4P78413 519 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 IL11RAQ14626 422 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TMEM132DQ14C87 1099 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 PTPN14Q15678 1187 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 DET1Q7L5Y6 550 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 SNX32Q86XE0 403 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 RYBPQ8N488 228 aaPredicted RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 CHCHD4Q8N4Q1 142 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 KLHDC1Q8N7A1 406 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 ZNF713Q8N859 430 aaPredicted RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 AVL9Q8NBF6 648 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 NOA1Q8NC60 698 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 LGMNQ99538 433 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 TDRD1Q9BXT4 1180 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 CNOT10Q9H9A5 744 aaKnown RBP2.76□□□□□ -1.97
CLK1-204ENST00000432425 CDH20Q9HBT6 801 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 MRGBPQ9NV56 204 aa2.76□□□□□ -1.97
CLK1-204ENST00000432425 IGSF1Q8N6C5 1336 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 TRBV5-5A0A0J9YX44 114 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 A0A1W2PPR1 153 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 TCRBV21S2A2A0A5A6 115 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 SYNDIG1LA6NDD5 238 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 ADAM20O43506 726 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 PGM3O95394 542 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 ATP1B1P05026 303 aa2.75□□□□□ -1.97
CLK1-204ENST00000432425 SAGP10523 405 aaPredicted RBP2.75□□□□□ -1.97
CLK1-204ENST00000432425 ELAVL4P26378 380 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms