RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 NPY4RP50391 375 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 NR0B1P51843 470 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 PPP5CP53041 499 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CLDN15P56746 228 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SNRPD1P62314 119 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 POLR2LP62875 67 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 KRT83P78385 493 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SCARB2Q14108 478 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PPA1Q15181 289 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PTPN14Q15678 1187 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PTGISQ16647 500 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CTU2Q2VPK5 515 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 HLA-BQ31612 363 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CASC4Q6P4E1 433 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 CTR9Q6PD62 1173 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 METTL7BQ6UX53 244 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 ANO5Q75V66 913 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SLC16A9Q7RTY1 509 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SPATA19Q7Z5L4 167 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 NRARPQ7Z6K4 114 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TMPRSS11BQ86T26 416 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PIGZQ86VD9 579 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SIAH3Q8IW03 269 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 MMD2Q8IY49 270 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 RCOR2Q8IZ40 523 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 BMPERQ8N8U9 685 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SLC4A11Q8NBS3 891 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 ATAD1Q8NBU5 361 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 ADAD2Q8NCV1 583 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 NCOA7Q8NI08 942 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 VANGL1Q8TAA9 524 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 UBLCP1Q8WVY7 318 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 HPSE2Q8WWQ2 592 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 RAD54LQ92698 747 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 DNASE1L2Q92874 299 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 P2RX5Q93086 422 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 OTUB1Q96FW1 271 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 GMPPAQ96IJ6 420 aaPredicted RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 MAGED4Q96JG8 741 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 FAM20AQ96MK3 541 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 BTBD9Q96Q07 612 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 USP28Q96RU2 1077 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 THUMPD3Q9BV44 507 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 CDK19Q9BWU1 502 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TDRD1Q9BXT4 1180 aaKnown RBP1.91□□□□□ -2.1
CDC40-204ENST00000431461 OR2B2Q9GZK3 357 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 WDR13Q9H1Z4 485 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 S1PR5Q9H228 398 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 UBQLN3Q9H347 655 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 TLE6Q9H808 572 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 Q9N2K0 584 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 SH3GLB2Q9NR46 395 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 PTTG2Q9NZH5 202 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 C5AR2Q9P296 337 aa1.91□□□□□ -2.1
CDC40-204ENST00000431461 C2orf92A0A1B0GVN3 265 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 A0A1W2PNU3 283 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 ILVBLA1L0T0 632 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 URADA6NGE7 173 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SDR42E2A6NKP2 422 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 YDJCA8MPS7 323 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TCP10L2B9ZVM9 353 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 F8VVB4 439 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 F8VWA3 439 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SLC1A7O00341 560 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SLC22A2O15244 555 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SCO2O43819 266 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TRMUO75648 421 aaKnown RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 ATP6AP2O75787 350 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 CEACAM4O75871 244 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 NADKO95544 446 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 MOCS2O96007 188 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 AMBPP02760 352 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 RAF1P04049 648 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 GBAP04062 536 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 FRMD6-AS1P0C7T7 363 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SMIM18P0DKX4 95 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 GNB3P16520 340 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 NR1D1P20393 614 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 AADACP22760 399 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 MPZP25189 248 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ATP5DP30049 168 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TCF7P36402 384 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 MTCP1P56278 107 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ROR1Q01973 937 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 PPARDQ03181 441 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 DMPKQ09013 629 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TAF10Q12962 218 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TNK1Q13470 666 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 PTK6Q13882 451 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 MORF4L2Q15014 288 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 EFTUD2Q15029 972 aaKnown RBP eCLIP1.9□□□□□ -2.11
CDC40-204ENST00000431461 P2RY6Q15077 328 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TXNRD3NBQ6F5E7 133 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 UGT3A1Q6NUS8 523 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ARHGAP11AQ6P4F7 1023 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 CHMP1BQ7LBR1 199 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 GALNTL5Q7Z4T8 443 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 RTN4RL2Q86UN3 420 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TICAM2Q86XR7 235 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 EID3Q8N140 333 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms