RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 FAM69BQ5VUD6 431 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 GARNL3Q5VVW2 1013 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 TCTN3Q6NUS6 607 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 SBSNQ6UWP8 590 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 MBOAT1Q6ZNC8 495 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 CCDC25Q86WR0 208 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 C17orf64Q86WR6 236 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 MMGT1Q8N4V1 131 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 MNS1Q8NEH6 495 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 OR56A3Q8NH54 315 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 FBXL8Q96CD0 374 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 TRIM44Q96DX7 344 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-207ENST00000430858 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 TSPAN17Q96FV3 270 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 RBBP8Q99708 897 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 HAUS8Q9BT25 410 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 SGPP1Q9BX95 441 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 FAM129AQ9BZQ8 928 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 WDR54Q9H977 334 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 LRRC4CQ9HCJ2 640 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 GPAMQ9HCL2 828 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 ZNF304Q9HCX3 659 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 ZNF71Q9NQZ8 489 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-207ENST00000430858 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-207ENST00000430858 TLK1Q9UKI8 766 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 CDC14AQ9UNH5 594 aa9.37□□□□□ -0.91
HDAC6-207ENST00000430858 RUVBL1Q9Y265 456 aaKnown RBP9.37□□□□□ -0.91
HDAC6-207ENST00000430858 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 SEC16AO15027 2179 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 KCNE1BA0A087WTH5 132 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ESYT3A0FGR9 886 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTAGE15A4D2H0 777 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PEX12O00623 359 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PRPF4O43172 522 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 SUV39H1O43463 412 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 SLC28A2O43868 658 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CNOT3O75175 753 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 SNRNP200O75643 2136 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PIAS1O75925 651 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GUCA1CO95843 209 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 IGHEP01854 428 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 C1QAP02745 245 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTAGE8P0CG41 777 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PLA2G2AP14555 144 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 NPPBP16860 134 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 STMN1P16949 149 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 SPRP35270 261 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GRK3P35626 688 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 OR1D4P47884 311 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CCL11P51671 97 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 RPS15AP62244 130 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CSNK1G2P78368 415 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CDKL1Q00532 357 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GUCY2DQ02846 1103 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 NAB1Q13506 487 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ZNF460Q14592 562 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 USP10Q14694 798 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 NKG7Q16617 165 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 NDUFA9Q16795 377 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PPP1R3AQ16821 1122 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GLE1Q53GS7 698 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GRTP1Q5TC63 336 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CPZQ66K79 652 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CEP128Q6ZU80 1094 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 COX15Q7KZN9 410 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 MRGPREQ86SM8 312 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ADAMTSL2Q86TH1 951 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTAGE6Q86UF2 777 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CEP97Q8IW35 865 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTAGE4Q8IX94 777 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ABHD11Q8NFV4 315 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 KIF18AQ8NI77 898 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 COL26A1Q96A83 441 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CABS1Q96KC9 395 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 C10orf90Q96M02 699 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 FER1L6-AS2Q96M78 137 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 GPR22Q99680 433 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 TRIM55Q9BYV6 548 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ZDHHC18Q9NUE0 388 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 CTNNAL1Q9UBT7 734 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 IKZF3Q9UKT9 509 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 G3BP2Q9UN86 482 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 TP53TG5Q9Y2B4 290 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 MTO1Q9Y2Z2 717 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 OARD1Q9Y530 152 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
HDAC6-207ENST00000430858 MAU2Q9Y6X3 613 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 ATMQ13315 3056 aa9.36□□□□□ -0.91
HDAC6-207ENST00000430858 NPEPPSL1A6NEC2 478 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 VSTM2BA6NLU5 285 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 CDC7O00311 574 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 CEACAM4O75871 244 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 DNAJB5O75953 348 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 WISP3O95389 354 aaPredicted RBP9.35□□□□□ -0.91
HDAC6-207ENST00000430858 MED26O95402 600 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 UMODP07911 640 aa9.35□□□□□ -0.91
HDAC6-207ENST00000430858 ANXA5P08758 320 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms