RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP50-208ENST00000430547 CCND1P24385 295 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 EMP3P54852 163 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 TIAL1Q01085 375 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP50-208ENST00000430547 MGAT5Q09328 741 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 FRG1Q14331 258 aaKnown RBP16.77■□□□□ 0.28
NUP50-208ENST00000430547 RBBP7Q16576 425 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 PRTGQ2VWP7 1150 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 VWA5B1Q5TIE3 1220 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 SHISA6Q6ZSJ9 500 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 MAATS1Q7Z4T9 603 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 LRRC56Q8IYG6 542 aaPredicted RBP16.77■□□□□ 0.28
NUP50-208ENST00000430547 ZBED8Q8IZ13 594 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 GALNT16Q8N428 558 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 MIEF2Q96C03 454 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 MVB12AQ96EY5 273 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 C10orf90Q96M02 699 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 SPSB2Q99619 263 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 WDR83Q9BRX9 315 aaKnown RBP16.77■□□□□ 0.28
NUP50-208ENST00000430547 YIPF2Q9BWQ6 316 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 PLAC1Q9HBJ0 212 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 ATP13A2Q9NQ11 1180 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 SEMA3GQ9NS98 782 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 CUEDC1Q9NWM3 386 aaPredicted RBP16.77■□□□□ 0.28
NUP50-208ENST00000430547 RUVBL1Q9Y265 456 aaKnown RBP16.77■□□□□ 0.28
NUP50-208ENST00000430547 VWA7Q9Y334 891 aa16.77■□□□□ 0.28
NUP50-208ENST00000430547 UBR5O95071 2799 aaPredicted RBP16.77■□□□□ 0.27
NUP50-208ENST00000430547 FAM187AA6NFU0 413 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 TTLL8A6PVC2 850 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 H7BY64 318 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 HAT1O14929 419 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 FANCGO15287 622 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 ANXA5P08758 320 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 SAT1P21673 171 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 FDXRP22570 491 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 FOXK1P85037 733 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 RELAQ04206 551 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 IGFBP7Q16270 282 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 NDUFA9Q16795 377 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 HKDC1Q2TB90 917 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 IRAK1BP1Q5VVH5 260 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 GARNL3Q5VVW2 1013 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 AGTRAPQ6RW13 159 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 MBOAT1Q6ZNC8 495 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 ATCAYQ86WG3 371 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 C17orf64Q86WR6 236 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 DTWD1Q8N5C7 304 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 EFCAB3Q8N7B9 438 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 PRAP1Q96NZ9 151 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 OR2A5Q96R48 311 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 CRB3Q9BUF7 120 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 ATG10Q9H0Y0 220 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 TMEM184CQ9NVA4 438 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 ARL15Q9NXU5 204 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 NSMCE4AQ9NXX6 385 aa16.76■□□□□ 0.27
NUP50-208ENST00000430547 DOCK10Q96BY6 2186 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 E7ESA3 106 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 IPO13O94829 963 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 MED26O95402 600 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 ITGA3P26006 1051 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 GRK3P35626 688 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 MLLT10P55197 1068 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 AP1S2P56377 157 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 RPS15AP62244 130 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 MRPS25P82663 173 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 C2orf54Q08AI8 447 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 AIMP2Q13155 320 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 NAE1Q13564 534 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 MYBPC3Q14896 1274 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 PHKG1Q16816 387 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 TUBB8Q3ZCM7 444 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 NADK2Q4G0N4 442 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 CAPN12Q6ZSI9 719 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 STRA8Q7Z7C7 330 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 SLC26A11Q86WA9 606 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 PLD3Q8IV08 490 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 PRSS58Q8IYP2 241 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 STT3BQ8TCJ2 826 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 PYROXD1Q8WU10 500 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 TM9SF4Q92544 642 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 MMABQ96EY8 250 aaPredicted RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 SMAD5Q99717 465 aaKnown RBP16.75■□□□□ 0.27
NUP50-208ENST00000430547 ERP44Q9BS26 406 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 DRC3Q9H069 523 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 WHRNQ9P202 907 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 C5AR2Q9P296 337 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 TRPC4Q9UBN4 977 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 FBXL4Q9UKA2 621 aa16.75■□□□□ 0.27
NUP50-208ENST00000430547 NBASA2RRP1 2371 aa16.74■□□□□ 0.27
NUP50-208ENST00000430547 VSTM2BA6NLU5 285 aa16.74■□□□□ 0.27
NUP50-208ENST00000430547 ENO2P09104 434 aaPredicted RBP16.74■□□□□ 0.27
NUP50-208ENST00000430547 ZGLP1P0C6A0 271 aa16.74■□□□□ 0.27
NUP50-208ENST00000430547 ETF1P62495 437 aaKnown RBP16.74■□□□□ 0.27
NUP50-208ENST00000430547 KLC1Q07866 573 aa16.74■□□□□ 0.27
NUP50-208ENST00000430547 DSG2Q14126 1118 aa16.74■□□□□ 0.27
NUP50-208ENST00000430547 CAPN13Q6MZZ7 669 aaPredicted RBP16.74■□□□□ 0.27
NUP50-208ENST00000430547 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms