RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ACOX1Q15067 660 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TYSND1Q2T9J0 566 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 RUNDC3AQ59EK9 446 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 CPZQ66K79 652 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ATG9BQ674R7 924 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 NADSYN1Q6IA69 706 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 NOXRED1Q6NXP6 359 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SNX20Q7Z614 316 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TSPAN33Q86UF1 283 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ZZZ3Q8IYH5 903 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ST13P5Q8NFI4 369 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 KCNH6Q9H252 994 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SLC6A13Q9NSD5 602 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SLC25A37Q9NYZ2 338 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 FNIP2Q9P278 1114 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 FAM220BPB1ANY3 271 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 H7C4K7 107 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TPD52L2O43399 206 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 LZTS3O60299 673 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 C9P02748 559 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 EBLN1P0CF75 366 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TUFMP49411 452 aaKnown RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 FLT3LGP49771 235 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DAPP51397 102 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 GABARAPL2P60520 117 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 PPP2R2BQ00005 443 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 OXA1LQ15070 435 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 XKR7Q5GH72 579 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ZNF57Q68EA5 555 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SLC39A13Q96H72 371 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 DIRAS2Q96HU8 199 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 C8orf48Q96LL4 319 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TTYH2Q9BSA4 534 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 GORASP2Q9H8Y8 452 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 TMED5Q9Y3A6 229 aa13.34□□□□□ -0.27
SGMS1-203ENST00000429490 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 CCDC182A6NF36 153 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 ARNTLO00327 626 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 KDELR3O43731 214 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.27
SGMS1-203ENST00000429490 PTPN5P54829 565 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 ZC3H12BQ5HYM0 836 aaKnown RBP13.33□□□□□ -0.27
SGMS1-203ENST00000429490 ADGRF1Q5T601 910 aa13.33□□□□□ -0.27
SGMS1-203ENST00000429490 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.27
SGMS1-203ENST00000429490 TRIT1Q9H3H1 467 aaKnown RBP13.33□□□□□ -0.27
SGMS1-203ENST00000429490 OR6C75A6NL08 312 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 HOXD9P28356 352 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 NCF4Q15080 339 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TRIQKQ629K1 86 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TNFAIP8L2Q6P589 184 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TTC23LQ6PF05 361 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 USP45Q70EL2 814 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 RAB43Q86YS6 212 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 PEX13Q92968 403 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 MGME1Q9BQP7 344 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TP63Q9H3D4 680 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TRPV5Q9NQA5 729 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 DNAJC27Q9NZQ0 273 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 CRNNQ9UBG3 495 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 PEX16Q9Y5Y5 336 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 LAMP1P11279 417 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 PRPS1L1P21108 318 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 HOXC13P31276 330 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 NNMTP40261 264 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-203ENST00000429490 DUOXA1Q1HG43 343 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 TJAP1Q5JTD0 557 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 KLHL17Q6TDP4 642 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 HMGN2P46Q86SG4 172 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 NLGN4XQ8N0W4 816 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 CSGALNACT1Q8TDX6 532 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 KATNBL1Q9H079 304 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 SPATA7Q9P0W8 599 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
SGMS1-203ENST00000429490 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 FAM25AB3EWG3 89 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 FAM25CB3EWG5 89 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 FAM25GB3EWG6 89 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 CTDSP2O14595 271 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 TGFB1P01137 390 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IGLV3-25P01717 112 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IL12RB1P42701 662 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 MVKQ03426 396 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 C2orf80Q0P641 193 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 IL18R1Q13478 541 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 SPRYD7Q5W111 196 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 STEAP3Q658P3 488 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 ERICH5Q6P6B1 374 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 USP51Q70EK9 711 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 RNF180Q86T96 592 aa13.32□□□□□ -0.28
SGMS1-203ENST00000429490 KRT73Q86Y46 540 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms