RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 CHRM5P08912 532 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 EPHA8P29322 1005 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RAB28P51157 221 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 IRF8Q02556 426 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RPA4Q13156 261 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 PCBP2Q15366 365 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 PRAMEF13Q5VWM6 474 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 IRGCQ6NXR0 463 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 WASH2PQ6VEQ5 465 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 NEK10Q6ZWH5 1172 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 MTDHQ86UE4 582 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 ENDOVQ8N8Q3 282 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 SUMF1Q8NBK3 374 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 GPR156Q8NFN8 814 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR9I1Q8NGQ6 314 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR56A3Q8NH54 315 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TWIST2Q8WVJ9 160 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 APOLD1Q96LR9 279 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RILPQ96NA2 401 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 ZNF570Q96NI8 536 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TGM7Q96PF1 710 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 NUDT22Q9BRQ3 303 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 DPH7Q9BTV6 452 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 MRPL1Q9BYD6 325 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RNPEPL1Q9HAU8 725 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 FAM60AQ9NP50 221 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CCDC177Q9NQR7 707 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 DNAJC11Q9NVH1 559 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 SPASTQ9UBP0 616 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 ZNF490Q9ULM2 529 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 PCDHGA2Q9Y5H1 932 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CCDC88CQ9P219 2028 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 MAGEB17A8MXT2 336 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 C4orf51C9J302 202 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 MATN2O00339 956 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 HAT1O14929 419 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 AZIN1O14977 448 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CTSVO60911 334 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 DNAJB6O75190 326 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CRCPO75575 148 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TGFB1P01137 390 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RPSAP08865 295 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 PKLRP30613 574 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 ARRB1P49407 418 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 BLKP51451 505 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 DIO3P55073 304 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CDC16Q13042 620 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 SLBPQ14493 270 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 RBBP5Q15291 538 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TEAD4Q15561 434 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 ZRSR2Q15696 482 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 FAM91A1Q658Y4 838 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TTC23LQ6PF05 361 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 UNC5DQ6UXZ4 953 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 IQCHQ86VS3 1027 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TMEM151BQ8IW70 566 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 SDR16C5Q8N3Y7 309 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 AMER3Q8N944 861 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 GFM2Q969S9 779 aaKnown RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 SKA1Q96BD8 255 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CNDP1Q96KN2 507 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 CATSPER2Q96P56 530 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 IER2Q9BTL4 223 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TUBB6Q9BUF5 446 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 EBPLQ9BY08 206 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 TRIM55Q9BYV6 548 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 NMUR2Q9GZQ4 415 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR51B5Q9H339 312 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 HEY2Q9UBP5 337 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 NKX1-2Q9UD57 310 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 PCOLCE2Q9UKZ9 415 aa9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
HMGCLL1-206ENST00000428842 LOC105369274A0A096LPK9 316 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 LOC102723532A0A0G2JNH3 316 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 A0A1B0GTQ1 180 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PMS2P1A4D2B8 440 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 STX16-NPEPL1H3BU86 382 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 DLL1O00548 723 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 STX16O14662 325 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 ESRRBO95718 433 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 TBX6O95947 436 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 ST6GAL1P15907 406 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 NCF2P19878 526 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 EFNA1P20827 205 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CALB2P22676 271 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 GRK2P25098 689 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CSF2RBP32927 897 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PTGER1P34995 402 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CPA2P48052 419 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 AP1S2P56377 157 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PLIN5Q00G26 463 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SP140Q13342 867 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 TUBB3Q13509 450 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 DUOXA1Q1HG43 343 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 LSM12Q3MHD2 195 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 FRMPD2BQ6IN97 320 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 TMEM26Q6ZUK4 368 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR4N4Q8N0Y3 316 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms