RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 FBXO5Q9UKT4 447 aa11.08□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 TRPC5OSA6NMA1 111 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 K7ESF4 209 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 STX7O15400 261 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 LAMTOR5O43504 91 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 PLRG1O43660 514 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ALBP02768 609 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 MPOP05164 745 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 UMPSP11172 480 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 PCNAP12004 261 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 HSD17B1P14061 328 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TFEBP19484 476 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LPOP22079 712 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ACVR2AP27037 513 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 DMWDQ09019 674 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 SQLEQ14534 574 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 CDKN3Q16667 212 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ATAD3CQ5T2N8 411 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TSTD2Q5T7W7 516 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ESRP1Q6NXG1 681 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 RFLNAQ6ZTI6 216 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 USP30Q70CQ3 517 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 HSD11B1LQ7Z5J1 315 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 CLEC14AQ86T13 490 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ADCK1Q86TW2 530 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LURAP1LQ8IV03 231 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 GALNT12Q8IXK2 581 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 FIG4Q92562 907 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 KLK6Q92876 244 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 RAB7BQ96AH8 199 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LYSMD1Q96S90 227 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 IER2Q9BTL4 223 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 SLC25A23Q9BV35 468 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 BTBD2Q9BX70 525 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 OXSMQ9NWU1 459 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 BAG5Q9UL15 447 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 FZD4Q9ULV1 537 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 PKP3Q9Y446 797 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ERVH48-1M5A8F1 160 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 POLBP06746 335 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 GSTM1P09488 218 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 C6P13671 934 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 EEF1B2P24534 225 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 MAT2AP31153 395 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ARL1P40616 181 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 HTR3AP46098 478 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ZNF140P52738 457 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 SRP54P61011 504 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ZNF45Q02386 682 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 PTSQ03393 145 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 EPS8Q12929 822 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 GRTP1Q5TC63 336 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 REP15Q6BDI9 236 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 NAPRTQ6XQN6 538 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LIPIQ6XZB0 460 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 VN1R5Q7Z5H4 357 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 THAP5Q7Z6K1 395 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 DDIASQ8IXT1 998 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 TBC1D21Q8IYX1 336 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ABCA7Q8IZY2 2146 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 FBXL6Q8N531 539 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 POC5Q8NA72 575 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 LILRB1Q8NHL6 650 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 FCRL3Q96P31 734 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 TRAF4Q9BUZ4 470 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 KIFC1Q9BW19 673 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 GATA5Q9BWX5 397 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 COL25A1Q9BXS0 654 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ZNF717Q9BY31 904 aaPredicted RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 BTBD1Q9H0C5 482 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 MMP27Q9H306 513 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ITM2CQ9NQX7 267 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 USP36Q9P275 1121 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 ABCD2Q9UBJ2 740 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 WARS2Q9UGM6 360 aaKnown RBP11.07□□□□□ -0.64
CECR3-201ENST00000428828 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 OAZ3Q9UMX2 235 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 PCDHGA8Q9Y5G5 932 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 DGKBQ9Y6T7 804 aa11.07□□□□□ -0.64
CECR3-201ENST00000428828 WDFY4Q6ZS81 3184 aa11.06□□□□□ -0.64
CECR3-201ENST00000428828 MROH6A6NGR9 719 aa11.06□□□□□ -0.64
CECR3-201ENST00000428828 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
CECR3-201ENST00000428828 BBIP1A8MTZ0 92 aa11.06□□□□□ -0.64
CECR3-201ENST00000428828 EI24O14681 340 aa11.06□□□□□ -0.64
CECR3-201ENST00000428828 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
CECR3-201ENST00000428828 RNGTTO60942 597 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms