RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TEX9Q8N6V9 391 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 PTGR2Q8N8N7 351 aaPredicted RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 GALNT6Q8NCL4 622 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 MYRIPQ8NFW9 859 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 OR8K5Q8NH50 307 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 MZB1Q8WU39 189 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 SLC5A11Q8WWX8 675 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 ZIM3Q96PE6 472 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 ZFYVE21Q9BQ24 234 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 TMEM79Q9BSE2 394 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 NDC1Q9BTX1 674 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 TWSG1Q9GZX9 223 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 IQCGQ9H095 443 aaKnown RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 MRPL46Q9H2W6 279 aaKnown RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 ARGLU1Q9NWB6 273 aaPredicted RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 OPTCQ9UBM4 332 aa13.96□□□□□ -0.18
SGCE-204ENST00000428696 COL27A1Q8IZC6 1860 aaPredicted RBP13.96□□□□□ -0.18
SGCE-204ENST00000428696 ASPMQ8IZT6 3477 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 LOC105369274A0A096LPK9 316 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 LOC102723532A0A0G2JNH3 316 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 OR2A25A4D2G3 310 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 LRRC14BA6NHZ5 514 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 H0YGG7 62 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 TLX3O43711 291 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 OR1F1O43749 312 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 SPAG7O75391 227 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 GNAZP19086 355 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 TAC1P20366 129 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 HRH2P25021 359 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 ARF3P61204 181 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 CSNK1G2P78368 415 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 CDC16Q13042 620 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 PDK4Q16654 411 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
SGCE-204ENST00000428696 BEND6Q5SZJ8 279 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 IGF2-ASQ6U949 168 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 C6orf15Q6UXA7 325 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 LRRC69Q6ZNQ3 347 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 MYLK4Q86YV6 388 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 OR4N4Q8N0Y3 316 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 TBC1D19Q8N5T2 526 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 PDPRQ8NCN5 879 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 ZNF248Q8NDW4 579 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 KCNE4Q8WWG9 221 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
SGCE-204ENST00000428696 TXLNGQ9NUQ3 528 aa13.95□□□□□ -0.18
SGCE-204ENST00000428696 K7EPI3 171 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 ZSCAN9O15535 394 aaPredicted RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 SRPX2O60687 465 aaPredicted RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 KLK3P07288 261 aaPredicted RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 MTHFD2P13995 350 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 EZRP15311 586 aaKnown RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 VARSP26640 1264 aaKnown RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 EEF1DP29692 281 aaKnown RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 GGT5P36269 586 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 SLC6A12P48065 614 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 RASA2Q15283 850 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 XKR6Q5GH73 641 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 ZNF425Q6IV72 752 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 NXPE4Q6UWF7 544 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 CACNA2D3Q8IZS8 1091 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 IQCKQ8N0W5 287 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 CSNK1A1LQ8N752 337 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 MR1Q95460 341 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 SMC6Q96SB8 1091 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 MACROD1Q9BQ69 325 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 AIF1LQ9BQI0 150 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 CAPS2Q9BXY5 557 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 C12orf65Q9H3J6 166 aaKnown RBP13.94□□□□□ -0.18
SGCE-204ENST00000428696 ANKMY1Q9P2S6 941 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 GRID1Q9ULK0 1009 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 ASB1Q9Y576 335 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 WDFY3Q8IZQ1 3526 aa13.94□□□□□ -0.18
SGCE-204ENST00000428696 FREM2Q5SZK8 3169 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 CCDC189A1A4V9 331 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 RAD1O60671 282 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 CPNE3O75131 537 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 GLRA3O75311 464 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 GSTA1P08263 222 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 C1GALT1C1LP0DN25 315 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 EPB42P16452 691 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 CD82P27701 267 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 EIF2S3P41091 472 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 CYP4F2P78329 520 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 IRF8Q02556 426 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 TCTE1Q5JU00 501 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 FAM199XQ6PEV8 388 aaPredicted RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 TTLL10Q6ZVT0 673 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 TIPARPQ7Z3E1 657 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 NLGN4XQ8N0W4 816 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms