RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 HKDC1Q2TB90 917 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 GARNL3Q5VVW2 1013 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 SPINK14Q6IE38 97 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 C11orf63Q6NUN7 778 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 C3P1Q6ZMU1 363 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 AMER3Q8N944 861 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 TMEM178AQ8NBL3 297 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 OR52K1Q8NGK4 314 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 OR13J1Q8NGT2 312 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 HMGCLL1Q8TB92 370 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 SIGLEC12Q96PQ1 595 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 PANX3Q96QZ0 392 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 DRC3Q9H069 523 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 KCNK13Q9HB14 408 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 MRPS30Q9NP92 439 aaKnown RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 UTP6Q9NYH9 597 aaKnown RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 C19orf25Q9UFG5 118 aaPredicted RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 SLC2A6Q9UGQ3 507 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 PPT2Q9UMR5 302 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 PCDHA3Q9Y5H8 950 aa13.88□□□□□ -0.19
PDAP1-202ENST00000426447 SNRNP200O75643 2136 aaKnown RBP13.88□□□□□ -0.19
PDAP1-202ENST00000426447 A0A1W2PPV9 198 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 KRT87PA6NCN2 255 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 E9PLN8 166 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 TXNDC9O14530 226 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 KPNA5O15131 536 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 ZNHIT1O43257 154 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 MFAP3LO75121 409 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 PHF2O75151 1096 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 TSPAN12O95859 305 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 CD99P14209 185 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 CTNNA1P35221 906 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 RPA3P35244 121 aaPredicted RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 AVPR1BP47901 424 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 ST13P50502 369 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 MAT1AQ00266 395 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 CDH17Q12864 832 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 FASTKQ14296 549 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 MEP1AQ16819 746 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 MINDY4Q4G0A6 757 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 AARS2Q5JTZ9 985 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 TSTD2Q5T7W7 516 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 OTOAQ7RTW8 1153 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 CPEB2Q7Z5Q1 589 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 LDB1Q86U70 411 aaPredicted RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 DOLPP1Q86YN1 238 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 ZC3H7AQ8IWR0 971 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 GHDCQ8N2G8 530 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 HORMAD2Q8N7B1 307 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 PHF10Q8WUB8 498 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 CYTH2Q99418 400 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 VKORC1Q9BQB6 163 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 PLCD4Q9BRC7 762 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 HES7Q9BYE0 225 aa13.87□□□□□ -0.19
PDAP1-202ENST00000426447 RUVBL2Q9Y230 463 aaKnown RBP13.87□□□□□ -0.19
PDAP1-202ENST00000426447 GOLGA6L9A6NEM1 432 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PRMT5O14744 637 aaPredicted RBP13.86□□□□□ -0.19
PDAP1-202ENST00000426447 FOXS1O43638 330 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 SUN1O94901 812 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PKMP14618 531 aaKnown RBP13.86□□□□□ -0.19
PDAP1-202ENST00000426447 ADRA1DP25100 572 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PTPN7P35236 360 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 ANP32AP39687 249 aaKnown RBP13.86□□□□□ -0.19
PDAP1-202ENST00000426447 RWDD2BP57060 319 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 NDUFA9Q16795 377 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PLAG1Q6DJT9 500 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 AADACL2Q6P093 401 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 SUSD1Q6UWL2 747 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PPP1R21Q6ZMI0 780 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 GALNTL5Q7Z4T8 443 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.86□□□□□ -0.19
PDAP1-202ENST00000426447 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 TSR3Q9UJK0 312 aaKnown RBP13.86□□□□□ -0.19
PDAP1-202ENST00000426447 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 TACC2O95359 2948 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 DCHS2Q6V1P9 2916 aa13.86□□□□□ -0.19
PDAP1-202ENST00000426447 NF1P21359 2839 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 ASPDHA6ND91 283 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 SOWAHDA6NJG2 315 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 SP1P08047 785 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 TTPAP49638 278 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 NAP1L1P55209 391 aaKnown RBP13.85□□□□□ -0.19
PDAP1-202ENST00000426447 HSF1Q00613 529 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 MAPKAPK3Q16644 382 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 H3F3CQ6NXT2 135 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 LANCL3Q6ZV70 420 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 ZNF534Q76KX8 674 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 ADCK2Q7Z695 626 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 CRLF3Q8IUI8 442 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 SMPDL3AQ92484 453 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 SCMH1Q96GD3 660 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 ZNF778Q96MU6 729 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 FRMD6Q96NE9 622 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 VN1R1Q9GZP7 353 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 CATSPERZQ9NTU4 200 aa13.85□□□□□ -0.19
PDAP1-202ENST00000426447 GNPTGQ9UJJ9 305 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms