RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 PROKR1Q8TCW9 393 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 APOBEC4Q8WW27 367 aaKnown RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 CDKL2Q92772 493 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 C10orf90Q96M02 699 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 DPH2Q9BQC3 489 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 GPAMQ9HCL2 828 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 IFT80Q9P2H3 777 aaPredicted RBP13.02□□□□□ -0.33
SNX3-204ENST00000426155 ANKMY1Q9P2S6 941 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 MAU2Q9Y6X3 613 aa13.02□□□□□ -0.33
SNX3-204ENST00000426155 SCN3AQ9NY46 2000 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 GCN1Q92616 2671 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 HYKKA2RU49 373 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 DSCR3O14972 297 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 HIST1H2AGP0C0S8 130 aaPredicted RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 CDH1P12830 882 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 NR1D1P20393 614 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 HIST1H2ADP20671 130 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 ECHS1P30084 290 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 GP5P40197 560 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 TSNQ15631 228 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 TCTE1Q5JU00 501 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 MRPL14Q6P1L8 145 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 KIF18AQ8NI77 898 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 MRRFQ96E11 262 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 HIST1H2AHQ96KK5 128 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 OR2A5Q96R48 311 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 OR4K3Q96R72 315 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 GPR22Q99680 433 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 CPNE1Q99829 537 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 HIST1H2AJQ99878 128 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 H2AFJQ9BTM1 129 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 SGPP1Q9BX95 441 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 GEMIN8Q9NWZ8 242 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 NINJ2Q9NZG7 142 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 TXNDC16Q9P2K2 825 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 CTSFQ9UBX1 484 aa13.01□□□□□ -0.33
SNX3-204ENST00000426155 GPN3Q9UHW5 284 aaPredicted RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 RUVBL1Q9Y265 456 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
SNX3-204ENST00000426155 FEZF1A0PJY2 475 aa13□□□□□ -0.33
SNX3-204ENST00000426155 K7EM74 188 aa13□□□□□ -0.33
SNX3-204ENST00000426155 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
SNX3-204ENST00000426155 MASP2O00187 686 aa13□□□□□ -0.33
SNX3-204ENST00000426155 FFAR3O14843 346 aa13□□□□□ -0.33
SNX3-204ENST00000426155 GPR42O15529 346 aa13□□□□□ -0.33
SNX3-204ENST00000426155 SRPX2O60687 465 aaPredicted RBP13□□□□□ -0.33
SNX3-204ENST00000426155 GSTA2P09210 222 aa13□□□□□ -0.33
SNX3-204ENST00000426155 EZRP15311 586 aaKnown RBP13□□□□□ -0.33
SNX3-204ENST00000426155 OTX2P32243 289 aa13□□□□□ -0.33
SNX3-204ENST00000426155 STX2P32856 288 aa13□□□□□ -0.33
SNX3-204ENST00000426155 ARSFP54793 590 aa13□□□□□ -0.33
SNX3-204ENST00000426155 ABATP80404 500 aa13□□□□□ -0.33
SNX3-204ENST00000426155 MEF2AQ02078 507 aaPredicted RBP13□□□□□ -0.33
SNX3-204ENST00000426155 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
SNX3-204ENST00000426155 ATP1A4Q13733 1029 aa13□□□□□ -0.33
SNX3-204ENST00000426155 BMPR2Q13873 1038 aa13□□□□□ -0.33
SNX3-204ENST00000426155 USP10Q14694 798 aaKnown RBP13□□□□□ -0.33
SNX3-204ENST00000426155 SLMAPQ14BN4 828 aa13□□□□□ -0.33
SNX3-204ENST00000426155 NAA25Q14CX7 972 aa13□□□□□ -0.33
SNX3-204ENST00000426155 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
SNX3-204ENST00000426155 C18orf21Q32NC0 220 aaPredicted RBP13□□□□□ -0.33
SNX3-204ENST00000426155 COLEC12Q5KU26 742 aa13□□□□□ -0.33
SNX3-204ENST00000426155 NKAPQ8N5F7 415 aaKnown RBP13□□□□□ -0.33
SNX3-204ENST00000426155 CSNK1A1LQ8N752 337 aa13□□□□□ -0.33
SNX3-204ENST00000426155 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
SNX3-204ENST00000426155 MNS1Q8NEH6 495 aa13□□□□□ -0.33
SNX3-204ENST00000426155 IFT81Q8WYA0 676 aa13□□□□□ -0.33
SNX3-204ENST00000426155 FBXL8Q96CD0 374 aa13□□□□□ -0.33
SNX3-204ENST00000426155 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
SNX3-204ENST00000426155 CABS1Q96KC9 395 aa13□□□□□ -0.33
SNX3-204ENST00000426155 MACROD1Q9BQ69 325 aa13□□□□□ -0.33
SNX3-204ENST00000426155 ZNF71Q9NQZ8 489 aaPredicted RBP13□□□□□ -0.33
SNX3-204ENST00000426155 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
SNX3-204ENST00000426155 MRPS2Q9Y399 296 aaKnown RBP13□□□□□ -0.33
SNX3-204ENST00000426155 FASNP49327 2511 aaKnown RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 NCF1BA6NI72 391 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 NCF1CA8MVU1 366 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 UMODP07911 640 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 NCF1P14598 390 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 NPPBP16860 134 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 FOLR3P41439 243 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 PMS2P54278 862 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 SLC12A2P55011 1212 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 AP1S2P56377 157 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 CSNK1G2P78368 415 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 POU4F1Q01851 419 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 ZKSCAN8Q15776 578 aaPredicted RBP12.99□□□□□ -0.33
SNX3-204ENST00000426155 FBXO48Q5FWF7 155 aa12.99□□□□□ -0.33
SNX3-204ENST00000426155 CAPN13Q6MZZ7 669 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms