RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ZUFSPQ96AP4 578 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 RAD51AP1Q96B01 352 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 SLC30A3Q99726 388 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 RAB17Q9H0T7 212 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 CUTCQ9NTM9 273 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 CTSFQ9UBX1 484 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 TRMT6Q9UJA5 497 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 CDC23Q9UJX2 597 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
VRK3-203ENST00000424804 TEX264Q9Y6I9 313 aa12.39□□□□□ -0.43
VRK3-203ENST00000424804 E2F3O00716 465 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 SAT1P21673 171 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 CCNFP41002 786 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 CLCN7P51798 805 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 PLTPP55058 493 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 SNRPNP63162 240 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 SLC7A5Q01650 507 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 SF1Q15637 639 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 WASHC2DQ5SRD0 308 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 RBM20Q5T481 1227 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 PRAMEF13Q5VWM6 474 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 PALM2Q8IXS6 379 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 CPNE9Q8IYJ1 553 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 ZADH2Q8N4Q0 377 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 AMER2Q8N7J2 671 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 GPATCH11Q8N954 259 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 OR11G2Q8NGC1 345 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 GIMAP7Q8NHV1 300 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 MAGEC3Q8TD91 643 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 DLG3Q92796 817 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 SLC22A18Q96BI1 424 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 LRRC39Q96DD0 335 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 AARSD1Q9BTE6 412 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 SLC29A3Q9BZD2 475 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 WHRNQ9P202 907 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 ZFATQ9P243 1243 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 STOX2Q9P2F5 926 aaPredicted RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 MRFAP1Q9Y605 127 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 COPG1Q9Y678 874 aaKnown RBP12.38□□□□□ -0.43
VRK3-203ENST00000424804 COMMD10Q9Y6G5 202 aa12.38□□□□□ -0.43
VRK3-203ENST00000424804 ANKUB1A6NFN9 424 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 IPO13O94829 963 aaKnown RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 KLHL18O94889 574 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 FKBP9O95302 570 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 MATN4O95460 622 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 CATP04040 527 aaKnown RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 ERGP11308 486 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 DCTP40126 519 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 GLRBP48167 497 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 VSX2P58304 361 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 CYP2A13Q16696 494 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 TCTE1Q5JU00 501 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 YOD1Q5VVQ6 348 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 ATG9BQ674R7 924 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 MAMDC2Q7Z304 686 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 METTL27Q8N6F8 245 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 PPP4R1Q8TF05 950 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 PYROXD1Q8WU10 500 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 PSMF1Q92530 271 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 KCNJ9Q92806 393 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 C10orf90Q96M02 699 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 WDR77Q9BQA1 342 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 RAB11FIP5Q9BXF6 653 aa12.37□□□□□ -0.43
VRK3-203ENST00000424804 SOX17Q9H6I2 414 aaPredicted RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
VRK3-203ENST00000424804 IGLV3-12A0A075B6K2 115 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 IGKV1-8A0A0C4DH67 115 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 OR2A25A4D2G3 310 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ARHGEF33A8MVX0 844 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 TP73O15350 636 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 SRPX2O60687 465 aaPredicted RBP12.36□□□□□ -0.43
VRK3-203ENST00000424804 AHSGP02765 367 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ALPPP05187 535 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ITGA3P26006 1051 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ATP5DP30049 168 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 EFNA3P52797 238 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 PGGT1BP53609 377 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 MGAT5Q09328 741 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
VRK3-203ENST00000424804 GRM7Q14831 915 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 TRADDQ15628 312 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 WHAMMP3Q1A5X7 153 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 PRTGQ2VWP7 1150 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
VRK3-203ENST00000424804 TEDDM1Q5T9Z0 273 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 DUPD1Q68J44 220 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 UGT3A1Q6NUS8 523 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 PIWIL4Q7Z3Z4 852 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms