RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CPNE3O75131 537 aaKnown RBP17.67■□□□□ 0.42
HDAC6-205ENST00000423941 STAT5AP42229 794 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 GPS2Q13227 327 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 PRTGQ2VWP7 1150 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 TCTE1Q5JU00 501 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 RHBDD2Q6NTF9 364 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 LRRC69Q6ZNQ3 347 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 LCA5Q86VQ0 697 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 GPR135Q8IZ08 494 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 OR4N4Q8N0Y3 316 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 ARHGEF39Q8N4T4 335 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 GALNT6Q8NCL4 622 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 ACMSDQ8TDX5 336 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 SNRNP27Q8WVK2 155 aaKnown RBP17.67■□□□□ 0.42
HDAC6-205ENST00000423941 NEIL2Q969S2 332 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 DCBLD2Q96PD2 775 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 NUDT4Q9NZJ9 180 aa17.67■□□□□ 0.42
HDAC6-205ENST00000423941 LOC101059948A0A1B0GTJ6 334 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 ZSCAN9O15535 394 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 IPO13O94829 963 aaKnown RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 ONECUT2O95948 504 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 HBQ1P09105 142 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 GDF5P43026 501 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 EMP3P54852 163 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 PCDH1Q08174 1060 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 E2F2Q14209 437 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 TSNAXIP1Q2TAA8 658 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 YOD1Q5VVQ6 348 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 DSELQ8IZU8 1212 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 CYP4X1Q8N118 509 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 UBTD2Q8WUN7 234 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 N4BP2L2Q92802 583 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 CCNL2Q96S94 520 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 TMEM109Q9BVC6 243 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 FAM117AQ9C073 453 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 CNOT10Q9H9A5 744 aaKnown RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 ACTR5Q9H9F9 607 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-205ENST00000423941 LHX9Q9NQ69 397 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 ABCF3Q9NUQ8 709 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 PCMTD2Q9NV79 361 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 CD274Q9NZQ7 290 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 PADI1Q9ULC6 663 aa17.66■□□□□ 0.42
HDAC6-205ENST00000423941 A0A0J9YVX5 310 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 NCF1BA6NI72 391 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 SYCE1LA8MT33 242 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 NCF1CA8MVU1 366 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 H0YGG7 62 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 UBXN8O00124 270 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 MEN1O00255 615 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 HAT1O14929 419 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 LCMT2O60294 686 aaKnown RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 CDH16O75309 829 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 RBP1P09455 135 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 SBK3P0C264 359 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 CDH1P12830 882 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 NCF1P14598 390 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 GLRBP48167 497 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ATP1A2P50993 1020 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ARF3P61204 181 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 WASHC2DQ5SRD0 308 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 KLC3Q6P597 504 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ALKBH8Q96BT7 664 aaKnown RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 TM4SF19Q96DZ7 209 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 THAP11Q96EK4 314 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 SELENOSQ9BQE4 189 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 CD244Q9BZW8 370 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ROPN1BQ9BZX4 212 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ROPN1Q9HAT0 212 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-205ENST00000423941 GPRC5BQ9NZH0 403 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 COPG2Q9UBF2 871 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 SRPK3Q9UPE1 567 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 ASB1Q9Y576 335 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 KCNE2Q9Y6J6 123 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 EPG5Q9HCE0 2579 aa17.65■□□□□ 0.42
HDAC6-205ENST00000423941 A0A1W2PPM1 405 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 PRAMEF4O60810 478 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 STK16O75716 305 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 WDR47O94967 919 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 CAPN1P07384 714 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 EPORP19235 508 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 WT1P19544 449 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 CCR8P51685 355 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 ARSFP54793 590 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 ALDH18A1P54886 795 aaKnown RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 UCNP55089 124 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 VSX2P58304 361 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 RPS15AP62244 130 aaKnown RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 SRSF6Q13247 344 aaKnown RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 GRM7Q14831 915 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 SETDB1Q15047 1291 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 CATSPEREQ5SY80 951 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 PRAMEF9Q5VWM5 478 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 METTL2BQ6P1Q9 378 aaKnown RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 NXPE4Q6UWF7 544 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 SLCO4C1Q6ZQN7 724 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 VN1R4Q7Z5H5 301 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 ZNF655Q8N720 491 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 PROKR1Q8TCW9 393 aa17.64■□□□□ 0.41
HDAC6-205ENST00000423941 EPS8L3Q8TE67 593 aaKnown RBP17.64■□□□□ 0.41
HDAC6-205ENST00000423941 SLC5A11Q8WWX8 675 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms